Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFB8
Confidence98.18%DateThu Jan 5 11:25:50 GMT 2012
Rank214Aligned Residues149
% Identity15%Templatec3ec2A_
PDB info PDB header:replicationChain: A: PDB Molecule:dna replication protein dnac; PDBTitle: crystal structure of the dnac helicase loader
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   133......140.........150.........160 .........170.........180.........190.........200.......
Predicted Secondary structure 















.....





















Query SS confidence 



























. . . . .














































Query Sequence  LNGPTTDIIGEAPAMQDVFRIIGRLSRS. . . . . SISVLINGESGTGKELVAHALHRHSPRAKAPFIALNMAAIPKDLIES
Query Conservation         


 
  
  
   
   
  .....  



 

 



   
  

  
     


 
 
        
 
Alig confidence 



























.....














































Template Conservation     



                             


 







 

 


  
                      
Template Sequence  WNANLDTYHPKNVSQNRALLTIRVFVHNFNPEEGKGLTFVGSPGVGKTHLAVATLKAIYEKKGIRGYFFDTKDLIFRLKH
Template Known Secondary structure  TT

SSS



SS

GGG



SSSSSS




Template Predicted Secondary structure 


























Template SS confidence 















































































   46...50.........60.........70.........80.........90.........100.........110.........120.....
 
   208.210.........220.........230.........240..... ....250.........260.........270.........280.....
Predicted Secondary structure 
























..

















Query SS confidence 





































. .







































Query Sequence  ELFGHEKGAFTGANTIRQGRFEQADGGTLFLDEIGDMP. . LDVQTRLLRVLADGQFYRVGGYAPVKVDVRIIAATHQNLE
Query Conservation   


      
 
     
    
  


 
  
  
 ..   
  
   
                  


  
   
 
Alig confidence 









.........


















..












..........
















Template Conservation            .........         




             
  
   ..........        
 


    
Template Sequence  LXDEGKDTKF. . . . . . . . . LKTVLNSPVLVLDDLGSERLSDWQRELISYIITY. . . . . . . . . . RYNNLKSTIITTNYSLQ
Template Known Secondary structure  T

S.........T
ST
SSS


..........TT




S
Template Predicted Secondary structure 


.........












..........





Template SS confidence 















































































   126...130..... ....140.........150.........160......... 170.........180......
 
   286...290.........300..
Predicted Secondary structure 






Query SS confidence 
















Query Sequence  QRVQEGKFREDLFHRLN
Query Conservation         
   
  

 
Alig confidence 




..









Template Conservation   
   ..    
  
  
Template Sequence  RSSVR. . ISADLASRLG
Template Known Secondary structure 

..
Template Predicted Secondary structure  ..
Template SS confidence 
















   187..190. ........200.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions