Job Description P0AFB8 Confidence 96.20% Date Thu Jan 5 11:25:50 GMT 2012 Rank 233 Aligned Residues 155 % Identity 17% Template c3e1sA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:exodeoxyribonuclease v, subunit recd; PDBTitle: structure of an n-terminal truncation of deinococcus radiodurans recd2 Resolution 2.20 Å

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		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.											.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.	.
Query Sequence		F	R	I	I	G	R	L	S	R	S	S	I	S	V	L	I	N	G	E	S	G	T	G	K	E	L	V	A	H	A	L	H	R	H	S	P	R	A	K	A	P	F	I	A	L	N	M	A	A	I	P	K	D	L	I	E	S	E	.	.	.	.	.	.	.	.	.	.	L	F	G	H	E	K	G	A	F	T	G	A
Query Conservation																																																												.	.	.	.	.	.	.	.	.	.
Alig confidence																																																												.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		Q	A	S	V	L	D	Q	L	A	G	H	R	L	V	V	L	T	G	G	P	G	T	G	K	S	T	T	T	K	A	V	A	D	L	A	E	S	L	G	L	E	V	G	L	C	A	P	T	G	K	A	A	R	R	L	G	E	V	T	G	R	T	A	S	T	V	H	R	L	L	G	Y	G	P	.	.	.	.	.	.
Template Known Secondary structure										T	T		S								T	T	S																T	T								S	S												T	S									T	T			T	.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure
Query SS confidence
Query Sequence		N	T	I	R	Q	G	R	F	E	Q	A	D	G	G	T	L	F	L	D	E	I	G	D	M	P	L	D	V	Q	T	R	L	L	R	V	L	A	D	G	Q	F	Y	R	V	G	G	Y	A	P	V	K	V	D	V	R	I	I	A	A	T	H	Q	N	L	E	Q	R	V	Q	E	G	K	F	R	E	D	L	F	H	R
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	G	F	R	H	N	H	L	E	P	A	P	Y	D	L	L	I	V	D	E	V	S	M	M	G	D	A	L	M	L	S	L	L	A	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	P	G	A	R	V	L	L	V	G	D	T	D	Q	L	P	P	V	D	A	G	L	P	L	L	A	L	A	Q	A
Template Known Secondary structure		T			S		S	S	S	S			S		S							G	G	G											T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T									T	T	S				S	S	S
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.															.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	V	I	R	V	H	L	P	P	L	R	E	R	R	E	D	I	P	R	L	A	R	H	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	P	T	I	K	L	T	Q	V	Y	R	Q	A	A	K	N	P	I	I	Q	A	A	H	G	L
Template Known Secondary structure		S														T
Template Predicted Secondary structure
Template SS confidence
		483	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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