Job Description P0AFB8 Confidence 97.87% Date Thu Jan 5 11:25:50 GMT 2012 Rank 218 Aligned Residues 155 % Identity 13% Template c2w58B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:primosome component (helicase loader); PDBTitle: crystal structure of the dnai Resolution 2.50 Å

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		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.							160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.
Query Sequence		L	N	G	P	T	T	D	I	I	G	E	A	P	A	M	Q	D	V	F	R	I	I	G	R	L	S	R	.	.	.	.	.	.	S	S	I	S	V	L	I	N	G	E	S	G	T	G	K	E	L	V	A	H	A	L	H	R	H	S	P	R	A	K	A	P	F	I	A	L	N	M	A	A	I	P	K	D	L	I	E
Query Conservation																													.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.
Template Conservation
Template Sequence		L	R	A	S	L	S	D	V	D	L	N	D	D	G	R	I	K	A	I	R	F	A	E	R	F	V	A	E	Y	E	P	G	K	K	M	K	G	L	Y	L	H	G	S	F	G	V	G	K	T	Y	L	L	A	A	I	A	N	E	L	A	K	R	N	V	S	S	L	I	V	Y	V	P	E	L	F	R	E	L	K	H
Template Known Secondary structure						S	S	S					S	T	T														T			T	T											S	S	S	S	S															S	S																T	T
Template Predicted Secondary structure
Template SS confidence
		1127	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.		.	.	.	.	.	.	240	.			.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure																													.									.	.
Query SS confidence																													.									.	.
Query Sequence		S	E	L	F	G	H	E	K	G	A	F	T	G	A	N	T	I	R	Q	G	R	F	E	Q	A	D	G	.	G	T	L	F	L	D	E	I	.	.	G	D	M	P	L	D	V	Q	T	R	L	L	R	V	L	A	D	G	Q	F	Y	R	V	G	G	Y	A	P	V	K	V	D	V	R	I	I	A	A	T	H	Q	N
Query Conservation																													.									.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.														.									.	.																		.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.
Template Sequence		S	L	Q	.	.	.	.	.	.	.	.	.	.	.	D	Q	T	M	N	E	K	L	D	Y	I	K	K	V	P	V	L	M	L	D	D	L	G	A	E	A	S	S	W	V	R	D	D	V	F	G	P	I	L	Q	Y	.	.	.	.	.	.	.	.	.	.	R	M	F	E	N	L	P	T	F	F	T	S	N	F	D
Template Known Secondary structure		T		S	.	.	.	.	.	.	.	.	.	.	.	S	S	T												S	S								S	S									T								.	.	.	.	.	.	.	.	.	.				T	T								S	S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1207	.	.												1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250											.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.
		284	.	.	.	.	.	290	.	.	.	.	.	.							.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.
Query Sequence		L	E	Q	R	V	Q	E	G	K	F	R	E	D	.	.	.	.	.	.	L	F	H	R	L	N	V	I	R	V	H	L
Query Conservation															.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.
Template Conservation
Template Sequence		M	Q	Q	L	A	H	H	L	T	Y	E	E	E	K	V	K	A	A	R	I	M	E	R	I	R	Y	L	A	Y	P	I
Template Known Secondary structure										T
Template Predicted Secondary structure
Template SS confidence
		1267	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions