Job Description P0AFB8 Confidence 95.67% Date Thu Jan 5 11:25:50 GMT 2012 Rank 239 Aligned Residues 109 % Identity 17% Template c2r2aB_ PDB info PDB header:toxin Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of n-terminal domain of zonular occludens toxin from2 neisseria meningitidis Resolution 1.82 Å

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		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.							.	.	.	190	.	.	.	.	.	.	.	.	.	200	.						.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.																.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.																.	.	.	.	.
Query Sequence		L	I	N	G	E	S	G	T	G	K	E	L	V	A	H	A	L	H	R	H	S	P	.	.	.	.	.	.	R	A	K	A	P	F	I	A	L	N	M	A	A	I	P	.	.	.	.	.	K	D	L	I	E	S	E	L	F	G	H	E	K	G	A	F	T	G	A	N	T	I	R	Q	G	R	F	E	Q	A	D	G
Query Conservation																								.	.	.	.	.	.																.	.	.	.	.
Alig confidence																								.	.	.	.	.	.																.	.	.	.	.
Template Conservation
Template Sequence		L	I	T	G	T	P	G	S	G	K	T	L	K	X	V	S	X	X	A	N	D	E	X	F	K	P	D	E	N	G	I	R	R	K	V	F	T	N	I	K	G	L	K	I	P	H	T	Y	I	E	T	D	A	K	K	L	P	K	S	T	D	E	Q	L	S	A	H	D	X	Y	E	W	I	K	K	P	E	N	I	G
Template Known Secondary structure							T	T	S	S													G	G	G	S			T	T	S										S	S	B		S						B			T	T	T		S	S			S	S	S		B	G	G	G					T	T	S	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.						.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure														.	.	.	.	.
Query SS confidence														.	.	.	.	.
Query Sequence		G	T	L	F	L	D	E	I	G	D	M	P	.	.	.	.	.	L	D	V	Q	T	R	L	L	R	V	L	A	D	G	Q	F	Y	R	V	G	G	Y	A	P	V	K	V	D	V	R	I	I	A	A	T	H	Q	N
Query Conservation														.	.	.	.	.
Alig confidence														.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.
Template Sequence		S	I	V	I	V	D	E	A	Q	D	V	W	P	A	R	S	A	G	S	K	I	P	E	N	V	Q	W	L	N	T	.	.	.	.	.	.	.	.	.	.	H	R	H	Q	G	I	D	I	F	V	L	T	Q	G	P
Template Known Secondary structure							T	T	G	G	G	T	S	B				T	T									G	G	G	G	.	.	.	.	.	.	.	.	.	.	G	G	G	T	T								S		G
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.											.	.	.	.	120	.	.	.	.	.	.	.	.	.	130

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions