Job Description P0AFB8 Confidence 99.83% Date Thu Jan 5 11:25:50 GMT 2012 Rank 64 Aligned Residues 116 % Identity 28% Template c2qxyB_ PDB info PDB header:transcription Chain: B: PDB Molecule:response regulator; PDBTitle: crystal structure of a response regulator from thermotoga2 maritima Resolution 1.95 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	V	W	V	V	D	D	D	S	S	I	R	W	V	L	E	R	A	L	A	G	A	G	L	T	C	T	T	F	E	N	G	A	E	V	L	E	A	L	A	S	K	T	P	D	V	L	L	S	D	I	R	M	P	G	M	D	G	L	A	L	L	K	Q	I	K	Q	R	H	P	M	L	P	V	I	I	M	T	A
Query Conservation
Alig confidence																																																						.
Template Conservation																																																						.
Template Sequence		P	T	V	X	V	V	D	E	S	R	I	T	F	L	A	V	K	N	A	L	E	K	D	G	F	N	V	I	W	A	K	N	E	Q	E	A	F	T	F	L	R	R	E	K	I	D	L	V	F	V	D	V	.	F	E	G	E	E	S	L	N	L	I	R	R	I	R	E	E	F	P	D	T	K	V	A	V	L	S	A
Template Known Secondary structure									S													G	G	G	T							S	S											S			S							.		S	T	T														T	T	S							S
Template Predicted Secondary structure																																																						.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure
Query SS confidence
Query Sequence		H	S	D	L	D	A	A	V	S	A	Y	Q	Q	G	A	F	D	Y	L	P	K	P	F	D	I	D	E	A	V	A	L	V	E	R	A	I	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	V	D	K	D	L	I	I	N	S	V	K	A	G	A	V	D	Y	I	L	K	P	F	R	L	D	Y	L	L	E	R	V	K	K	I	I	S
Template Known Secondary structure															T		S					S	S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions