Job Description P0AFB8 Confidence 87.57% Date Thu Jan 5 11:25:50 GMT 2012 Rank 472 Aligned Residues 87 % Identity 16% Template c2qq0B_ PDB info PDB header:transferase Chain: B: PDB Molecule:thymidine kinase; PDBTitle: thymidine kinase from thermotoga maritima in complex with2 thymidine + appnhp Resolution 1.50 Å

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		164	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		V	L	I	N	G	E	S	G	T	G	K	E	.	L	V	A	H	A	L	H	R	H	S	P	R	A	K	A	P	F	I	A	L	N	M	A	A	I	P	K	D	L	I	E	S	E	L	F	G	H	E	K	G	A	F	T	G	A	N	T	I	R	Q	G	R	F	E	Q	A	D	G	G	T	L	F	L	D	E	I	G
Query Conservation														.
Alig confidence														.																						.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.
Template Sequence		T	V	I	T	G	P	M	Y	S	G	K	T	T	E	L	L	S	F	V	E	I	Y	K	L	G	K	K	K	V	A	V	F	K	P	.	.	.	.	.	.	.	.	.	K	S	T	M	I	V	S	H	V	E	A	H	V	I	E	R	P	E	E	M	R	K	Y	I	E	E	D	T	R	G	V	F	I	D	E	V	Q
Template Known Secondary structure							S	T	T	S	S															T	T									.	.	.	.	.	.	.	.	.				B						B					S	S	G	G	G	G	G	G	G			T	T									G	G
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.										40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	M	P	L	D	V	Q	T	R	L	L	R	V	L	A	D	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	F	N	P	S	L	F	E	V	V	K	D	L	L	D	R	G
Template Known Secondary structure		G	S		T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions