Job Description P0AFB8 Confidence 98.08% Date Thu Jan 5 11:25:50 GMT 2012 Rank 215 Aligned Residues 167 % Identity 16% Template c2qgzA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative primosome component; PDBTitle: crystal structure of a putative primosome component from2 streptococcus pyogenes serotype m3. northeast structural3 genomics target dr58 Resolution 2.40 Å

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		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.						.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.																								.
Query SS confidence																																													.	.	.	.	.																								.
Query Sequence		E	R	A	I	S	H	Y	Q	E	Q	Q	Q	P	R	N	V	Q	L	N	G	P	T	T	D	I	I	G	E	A	P	A	M	Q	D	V	F	R	I	I	G	R	L	S	.	.	.	.	.	R	S	S	I	S	V	L	I	N	G	E	S	G	T	G	K	E	L	V	A	H	A	L	.	H	R	H	S	P	R	A	K
Query Conservation																																													.	.	.	.	.																								.
Alig confidence																																													.	.	.	.	.																								.
Template Conservation
Template Sequence		Q	A	A	I	S	E	R	I	Q	L	V	S	L	P	K	S	Y	R	H	I	H	L	S	D	I	D	V	N	N	A	S	R	M	E	A	F	S	A	I	L	D	F	V	E	Q	Y	P	S	A	E	Q	K	G	L	Y	L	Y	G	D	M	G	I	G	K	S	Y	L	L	A	A	M	A	H	E	L	S	E	K	K	G
Template Known Secondary structure								T					S	S		G	G	G	G	S			G	G	G	S				S																		S		S	S									S	T	T	S	S																S
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	F	I	A	L	N	M	A	A	I	P	K	D	L	I	E	S	E	L	F	G	H	E	K	G	A	F	T	G	A	N	T	I	R	Q	G	R	F	E	Q	A	D	G	G	T	L	F	L	D	E	I	G	D	M	P	L	D	V	Q	T	R	L	L	R	V	L	A	D	G	Q	F	Y	R	V	G	G	Y	A	P
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	S	T	T	L	L	H	F	P	S	F	A	I	D	V	K	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	S	K	E	E	I	D	A	V	K	N	V	P	V	L	I	L	D	D	I	G	A	V	R	D	E	V	L	Q	V	I	L	Q	Y	R	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T					T	S	S						T					T	T	T	T									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.															.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.		.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		V	K	V	D	V	R	I	I	A	A	T	H	Q	N	L	E	Q	R	V	Q	E	G	K	F	R	E	D	.	L	F	H	R	L	N	V	I	R	V	H	L	P
Query Conservation																													.
Alig confidence																													.
Template Conservation
Template Sequence		M	L	E	E	L	P	T	F	F	T	S	N	Y	S	F	A	D	L	E	R	K	W	A	W	Q	A	K	R	V	M	E	R	V	R	Y	L	A	R	E	F	H
Template Known Secondary structure					T								S	S							T	T							S
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions