Job Description P0AFB8 Confidence 99.08% Date Thu Jan 5 11:25:50 GMT 2012 Rank 172 Aligned Residues 116 % Identity 21% Template c2kjqA_ PDB info PDB header:replication Chain: A: PDB Molecule:dnaa-related protein; PDBTitle: solution structure of protein nmb1076 from neisseria meningitidis.2 northeast structural genomics consortium target mr101b. Resolution UNK

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		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	S	S	I	S	V	L	I	N	G	E	S	G	T	G	K	E	L	V	A	H	A	L	H	R	H	S	P	R	A	K	A	P	F	I	A	L	N	M	A	A	I	P	K	D	L	I	E	S	E	L	F	G	H	E	K	G	A	F	T	G	A	N	T	I	R	Q	G	R	F	E	Q	A	D	G	G	T	L	F
Query Conservation
Alig confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	K	H	G	Q	F	I	Y	V	W	G	E	E	G	A	G	K	S	H	L	L	Q	A	W	V	A	Q	A	L	E	A	G	K	N	A	A	Y	I	D	A	A	S	M	P	L	T	D	A	A	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	E	Y	L	A
Template Known Secondary structure						S						S	S	S	T	T	T	T													T	T	T								T	T	T	S				G	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G		S
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.																									.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.		.	.	.	.	.	.	.	310
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		L	D	E	I	G	D	M	P	L	D	V	Q	T	R	L	L	R	V	L	A	D	G	Q	F	Y	R	V	G	G	Y	A	P	V	K	V	D	V	R	I	I	A	A	T	H	Q	N	L	E	Q	R	V	Q	E	G	K	F	R	E	D	L	F	H	R	L	N	.	V	I	R	V	H	L	P	P
Query Conservation																																																																			.
Alig confidence																							.	.	.	.	.	.	.	.	.	.																		.	.	.															.
Template Conservation																							.	.	.	.	.	.	.	.	.	.																		.	.	.
Template Sequence		V	D	Q	V	E	K	L	G	N	E	E	Q	A	L	L	F	S	I	F	N	R	.	.	.	.	.	.	.	.	.	.	F	R	N	S	G	K	G	F	L	L	L	G	S	E	Y	T	P	.	.	.	Q	Q	L	V	I	R	E	D	L	R	T	R	M	A	Y	C	L	V	Y	E	V	K	P
Template Known Secondary structure				S	T	T				S													.	.	.	.	.	.	.	.	.	.					T									S	S		T	.	.	.	T	T	S	S									G	G	G	S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.																		.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.											110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.				.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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