Job Description P0AFB8 Confidence 94.05% Date Thu Jan 5 11:25:50 GMT 2012 Rank 268 Aligned Residues 112 % Identity 21% Template c2ia5C_ PDB info PDB header:transferase Chain: C: PDB Molecule:polynucleotide kinase; PDBTitle: t4 polynucleotide kinase/phosphatase with bound sulfate and2 magnesium. Resolution 2.90 Å

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		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	I	N	G	E	S	G	T	G	K	E	L	V	A	H	A	L	H	R	H	S	P	R	A	K	A	P	F	I	A	L	N	M	A	A	I	P	K	D	L	I	E	S	E	L	F	G	H	E	K	G	A	F	T	G	A	N	T	I	R	Q	G	R	F	E	Q	A	D	G	G	T	L	F	L	D	E	I	G	D
Query Conservation
Alig confidence																				.	.	.	.												.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.												.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	L	T	I	G	C	P	G	S	G	K	S	T	W	A	R	E	F	.	.	.	.	I	A	K	N	P	G	F	Y	N	I	N	.	.	.	.	.	R	D	D	Y	R	Q	S	I	M	A	H	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	D	E	Y	K	Y	T	K	K	K	E	G
Template Known Secondary structure								T	T	S	S									.	.	.	.				S	T	T						.	.	.	.	.									T	T		S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G
Template Predicted Secondary structure																				.	.	.	.												.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.					.	.	.	.	.	.	.	30	.	.	.						.	.	.	.	.	.	40	.	.	.	.	.	.																		.	.	.	50	.	.	.	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		M	P	L	D	V	Q	T	R	L	L	R	V	L	A	D	G	Q	F	Y	R	V	G	G	Y	A	P	V	K	V	D	V	R	I	I	A	A	T	H	Q	N	L	E	Q	R	V	Q	E	G	K	F	R	E	D	L	F	H	R	L	N	V	I	R	V	H	L	P	P
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.
Template Sequence		I	V	T	G	M	Q	F	D	T	A	K	S	I	L	Y	.	.	.	.	.	.	.	.	.	G	G	D	S	V	K	G	V	I	I	S	D	T	N	L	N	P	E	R	R	L	A	W	E	T	F	A	K	E	Y	G	W	K	V	E	H	K	V	F	D	V	P	W
Template Known Secondary structure																T	.	.	.	.	.	.	.	.	.	S		T	T								S				S															T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.
Template SS confidence
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.										.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions