Job Description P0AFB8 Confidence 95.13% Date Thu Jan 5 11:25:50 GMT 2012 Rank 248 Aligned Residues 104 % Identity 15% Template c2gxaA_ PDB info PDB header:replication/dna Chain: A: PDB Molecule:replication protein e1; PDBTitle: crystal structure of papillomavirus e1 hexameric helicase2 with ssdna and mgadp Resolution 3.15 Å

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		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	I	N	G	E	S	G	T	G	K	E	L	V	A	H	A	L	H	R	H	S	P	R	A	K	A	P	F	I	A	L	N	M	A	A	I	P	K	D	L	I	E	S	E	L	F	G	H	E	K	G	A	F	T	G	A	N	T	I	R	Q	G	R	F	E	Q	A	D	G	G	T	L	F	L	D	E	I	G	D
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	F	I	G	P	P	N	T	G	K	S	M	L	C	N	S	L	I	H	F	.	.	.	.	.	.	.	.	.	.	L	G	G	S	V	L	S	F	A	N	H	K	S	H	F	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	S	L	A	D	T	R	A	A	L	V	D	D	A	T	H
Template Known Secondary structure							S	S	S	S	S												.	.	.	.	.	.	.	.	.	.	T	T						T	T	S		T	T	S		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	G	G	G	T		S						S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		429	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.											450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.																	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.				.	.	.	.	280	.	.	.	.	.	.					.	.	.	290	.	.	.
Predicted Secondary structure																																		.	.	.												.	.	.	.
Query SS confidence																																		.	.	.												.	.	.	.
Query Sequence		M	P	L	D	V	Q	T	R	L	L	R	V	L	A	D	G	Q	F	Y	R	V	G	G	Y	A	P	V	K	V	D	V	R	.	.	.	I	I	A	A	T	H	Q	N	L	E	Q	.	.	.	.	R	V	Q	E	G	K	F
Query Conservation																																		.	.	.												.	.	.	.
Alig confidence																																		.	.	.												.	.	.	.
Template Conservation
Template Sequence		A	C	W	R	Y	F	D	T	Y	L	R	N	A	L	D	G	Y	P	V	S	I	D	R	K	H	K	A	A	V	Q	I	K	A	P	P	L	L	V	T	S	N	I	D	V	Q	A	E	D	R	Y	L	Y	L	H	S	R	V
Template Known Secondary structure										T	T						S	S							S	S	S															S	S		T	T	T		S	T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		483	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions