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Job DescriptionP0AFB8
Confidence99.18%DateThu Jan 5 11:25:50 GMT 2012
Rank163Aligned Residues214
% Identity23%Templatec2ce7B_
PDB info PDB header:cell division proteinChain: B: PDB Molecule:cell division protein ftsh; PDBTitle: edta treated
Resolution2.44 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   132.......140.........150....... ..160.........170.........180.........190.........200.
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Query Sequence  QLNGPTTDIIGEAPAMQDVFRIIGRL. . . . . . . . . . SRSSISVLINGESGTGKELVAHALHRHSPRAKAPFIALNMAAIP
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Template Sequence  NKRVTFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARMPKGILLVGPPGTGKTLLARAVAGE. . . ANVPFFHISGSDFV
Template Known Secondary structure  S



GGG

S

TTTT



S

TTSS...TT

GGGTT
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   155....160.........170.........180.........190.........200.........210....... ..220.........230.
 
   202.......210.........220.........230. ........240...... ...250.........260.........270....
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Query Sequence  KDLIESELFGHEKGAFTGANTIRQGRFEQA. . . DGGTLFLDEIGDMPL. . . . DVQTRLLRVLADGQFYRVGGYAPVKVDV
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Template Sequence  ELFVGVG. . . . . . . . . . . . AARVRDLFAQAKAHAPCIVFIDEIDAVGRDEREQTLNQLLVEMDG. . . . . . . . . FDSKEGI
Template Known Secondary structure  T

TT............
STGGGT



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GGGT
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   232...... .240.........250.........260.........270.........280... ......290
 
   275....280.........290.........300.........310.........320.........330.........340.........350....
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Query Sequence  RIIAATHQNLEQRVQEGKFREDLFHRLNVIRVHLPPLRERREDIPRLARHFLQVAARELGVEAKLLHPETEAALTRLAWP
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Template Sequence  IVMAATNRP. . DILDPALLRPGRFDK. . KIVVDPPDMLGRK. . . . . . . . . . . . KILEIHTRNKPLAEDVNLEIIAKRTPG
Template Known Secondary structure  S
G..GGS
GGGGSTTSS
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B
TT

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   301........ 310.........320.... .....330....... ..340.........350.........360....
 
   355....360.........370. ........380.....
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Query Sequence  GNVRQLENTCRWLTVMA. . . AGQEVLIQDLPGEL
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Template Sequence  FVGADLENLVNEAALLAAREGRDKITMKDFEEAI
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SSB
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   365....370.........380.........390........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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