Job Description P0AFB8 Confidence 99.39% Date Thu Jan 5 11:25:50 GMT 2012 Rank 149 Aligned Residues 241 % Identity 20% Template c2c9oC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:ruvb-like 1; PDBTitle: 3d structure of the human ruvb-like helicase ruvbl1 Resolution 2.2 Å

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		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	L	V	E	R	A	I	S	H	Y	Q	E	Q	Q	Q	P	R	N	V	Q	L	N	G	P	T	T	D	I	I	G	E	A	P	A	M	Q	D	V	F	R	I	I	G	R	L	S	R	S	S	I	S	V	L	I	N	G	E	S	G	T	G	K	E	L	V	A	H	A	L	H	R	H	S	P	R	A	K	A	P
Query Conservation
Alig confidence																																																																													.
Template Conservation																																																																													.
Template Sequence		R	I	A	S	H	S	H	V	K	G	L	G	L	D	E	S	G	L	A	K	Q	A	A	S	G	L	V	G	Q	E	N	A	R	E	A	C	G	V	I	V	E	L	I	K	S	K	K	M	A	G	R	A	V	L	L	A	G	P	P	G	T	G	K	T	A	L	A	L	A	I	A	Q	E	L	G	.	S	K	V	P
Template Known Secondary structure		G	T	G	G	G	T	T			S			B		T	T	S		B		S			T	T			S																	T	T			T	T									T	T	S	S														.	T	T	S
Template Predicted Secondary structure																																																																													.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.
		192	.	.	.	.	.	.	.	200	.	.																																														.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	I	A	L	N	M	A	A	I	P	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	I	E	S	E	L	F	G	H	E	K	G	A	F	T	G	A	N	T	I	R	Q	G
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	C	P	M	V	G	S	E	V	Y	S	T	E	I	K	K	T	E	V	L	M	E	N	F	R	R	A	I	G	L	R	I	K	E	T	K	K	K	E	I	I	Q	D	V	T	L	H	D	L	D	V	A	G	E	I	N	K	V	V	N	K	Y	I	D	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							G	G	G	G			S	S	S													T																							T	T														T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	E	Q	A	D	G	G	T	L	F	L	D	E	I	G	D	M	P	L	D	V	Q	T	R	L	L	R	V	L	A	D	G	Q	F	Y	R	V	G	G	Y	A	P	V	K	V	D	V	R	I	I	A	A	T	H	Q	N	L	E	Q	R	V	Q	E	G	K	F	R	E	D	L	F	H	R	L	N	V	I	R	V
Query Conservation
Alig confidence																																																											.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.
Template Sequence		G	I	A	E	L	V	P	G	V	L	F	V	D	E	V	H	M	L	D	I	E	C	F	T	Y	L	H	R	A	L	E	S	S	I	A	P	I	V	I	F	A	S	N	R	G	N	C	V	I	R	G	T	E	D	I	T	S	.	.	.	.	.	.	P	H	G	I	P	L	D	L	L	D	R	V	M	I	I	R	T
Template Known Secondary structure		T	S													G	G	G		B												T	S	S	S											S					B	T	T	S	S				.	.	.	.	.	.		T	T							T	T
Template Predicted Secondary structure																																																											.	.	.	.	.	.
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.							.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.				.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure																																																																				.	.	.
Query SS confidence																																																																				.	.	.
Query Sequence		H	L	P	P	L	R	E	R	R	E	D	I	P	R	L	A	R	H	F	L	Q	V	A	A	R	E	L	G	V	E	A	K	L	L	H	P	E	T	E	A	A	L	T	R	L	A	W	P	G	N	V	R	Q	L	E	N	T	C	R	W	L	T	V	M	A	A	.	.	.	G	Q	E	V	L	I	Q	D	L	P	G
Query Conservation																																																																				.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	L	Y	T	P	Q	E	.	.	.	.	.	.	.	.	.	.	.	M	K	Q	I	I	K	I	R	A	Q	T	E	G	I	N	I	S	E	E	A	L	N	H	L	G	E	I	G	T	K	T	T	L	R	Y	S	V	Q	L	L	T	P	A	N	L	L	A	K	I	N	G	K	D	S	I	E	K	E	H	V	E	E
Template Known Secondary structure									.	.	.	.	.	.	.	.	.	.	.												T	T			B															S								T											T	T		S	S	B
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		364	.	.	.	.	.	370												.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
		384	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		433	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions