Job Description P0AFB8 Confidence 99.20% Date Thu Jan 5 11:25:50 GMT 2012 Rank 161 Aligned Residues 58 % Identity 16% Template c1umqA_ PDB info PDB header:dna-binding protein Chain: A: PDB Molecule:photosynthetic apparatus regulatory protein; PDBTitle: solution structure and dna binding of the effector domain2 from the global regulator prra(rega) from r. sphaeroides:3 insights into dna binding specificity Resolution UNK

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		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	A	L	R	S	G	H	Q	N	L	L	S	E	A	Q	P	E	L	E	R	T	L	L	T	T	A	L	R	H	T	Q	G	H	K	Q	E	A	A	R	L	L	G	W	G	R	N	T	L	T	R	K	L	K	E	L	G	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	G	E	S	L	P	P	P	P	E	N	P	M	S	A	D	R	V	R	W	E	H	I	Q	R	I	Y	E	M	C	D	R	N	V	S	E	T	A	R	R	L	N	M	H	R	R	T	L	Q	R	I	L	A	K	R	S	P
Template Known Secondary structure				T	T	S	S				S		S	S	S																	T	T	S										T	S											T	S	S
Template Predicted Secondary structure
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions