Job Description P0AFB8 Confidence 98.54% Date Thu Jan 5 11:25:50 GMT 2012 Rank 205 Aligned Residues 199 % Identity 21% Template c1iqpF_ PDB info PDB header:replication Chain: F: PDB Molecule:rfcs; PDBTitle: crystal structure of the clamp loader small subunit from2 pyrococcus furiosus Resolution 2.80 Å

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		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.			.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																																																													.	.
Query SS confidence																																																													.	.
Query Sequence		L	N	G	P	T	T	D	I	I	G	E	A	P	A	M	Q	D	V	F	R	I	I	G	R	L	S	R	S	S	I	S	V	L	I	N	G	E	S	G	T	G	K	E	L	V	A	H	A	L	H	R	H	S	P	R	A	K	A	P	.	.	F	I	A	L	N	M	A	A	I	P	K	D	L	I	E	S	E	L	F
Query Conservation																																																													.	.
Alig confidence																															.	.																													.	.
Template Conservation																															.	.
Template Sequence		R	P	Q	R	L	D	D	I	V	G	Q	E	H	I	V	K	R	L	K	H	Y	V	K	T	G	S	M	P	H	.	.	L	L	F	A	G	P	P	G	V	G	K	T	T	A	A	L	A	L	A	R	E	L	F	G	E	N	W	R	H	N	F	L	E	L	N	A	S	D	E	R	G	I	N	V	I	R	E	K	V
Template Known Secondary structure					S	G	G	G			S													T	T	T					.	.					S		T	T	S	S	T	T												G	G	G										T	T	T	S	S
Template Predicted Secondary structure																															.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.			.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure
Query SS confidence
Query Sequence		G	H	E	K	G	A	F	T	G	A	N	T	I	R	Q	G	R	F	E	Q	A	D	G	G	T	L	F	L	D	E	I	G	D	M	P	L	D	V	Q	T	R	L	L	R	V	L	A	D	G	Q	F	Y	R	V	G	G	Y	A	P	V	K	V	D	V	R	I	I	A	A	T	H	Q	N	L	E	Q	R	V	Q	E
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Template Sequence		K	E	F	A	R	T	K	P	I	G	G	A	S	F	K	.	.	.	.	.	.	.	.	.	I	I	F	L	D	E	A	D	A	L	T	Q	D	A	Q	Q	A	L	R	R	T	M	E	M	.	.	.	.	.	.	.	.	.	.	.	F	S	S	N	V	R	F	I	L	S	C	N	Y	.	.	.	.	.	.	.	S
Template Known Secondary structure					T	T	S			S	S	S		S			.	.	.	.	.	.	.	.	.						T	G	G	G	S															.	.	.	.	.	.	.	.	.	.	.	T	T	T	T								S		.	.	.	.	.	.	.	G
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.										.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.												.	.	.	140	.	.	.	.	.	.	.	.	.								150
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	F	R	E	D	L	F	H	R	L	N	V	I	R	V	H	L	P	P	L	R	E	R	R	E	D	I	P	R	L	A	R	H	F	L	Q	V	A	A	R	E	L	G	V	E	A	K	L	L	H	P	E	T	E	A	A	L	T	R	L	A	W	P	G	N	V	R	Q	L	E	N	T	C	R	W	L	T	V	M
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.												.	.	.															.
Template Conservation																												.	.	.	.	.	.	.	.												.	.	.															.
Template Sequence		S	K	I	I	E	P	I	Q	S	R	C	A	I	F	R	F	R	P	L	R	D	E	D	I	A	K	.	.	.	.	.	.	.	.	R	L	R	Y	I	A	E	N	E	G	L	.	.	.	E	L	T	E	E	G	L	Q	A	I	L	Y	I	A	.	E	G	D	M	R	R	A	I	N	I	L	Q	A	A	A	A	L
Template Known Secondary structure		G	G	S						T	T																	.	.	.	.	.	.	.	.										T		.	.	.															.	T	T														T	T
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.												.	.	.															.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.									.	.	.	180	.	.	.	.	.	.	.				.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		371	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	K
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		219	220

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions