Job Description P0AFB8 Confidence 99.00% Date Thu Jan 5 11:25:50 GMT 2012 Rank 176 Aligned Residues 244 % Identity 11% Template c1fnnB_ PDB info PDB header:cell cycle Chain: B: PDB Molecule:cell division control protein 6; PDBTitle: crystal structure of cdc6p from pyrobaculum aerophilum Resolution 2.00 Å

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		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.					.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure																																			.	.	.	.																								.
Query SS confidence																																			.	.	.	.																								.
Query Sequence		Q	Q	P	R	N	V	Q	L	N	G	P	T	T	D	I	I	G	E	A	P	A	M	Q	D	V	F	R	I	I	G	R	L	S	.	.	.	.	R	S	S	I	S	V	L	I	N	G	E	S	G	T	G	K	E	L	V	A	H	A	L	.	H	R	H	S	P	R	A	K	A	P	F	I	A	L	N	M	A	A	I
Query Conservation																																			.	.	.	.																								.
Alig confidence																																			.	.	.	.																								.
Template Conservation
Template Sequence		V	D	D	S	V	F	S	P	S	Y	V	P	K	R	L	P	H	R	E	Q	Q	L	Q	Q	L	D	I	L	L	G	N	W	L	R	N	P	G	H	H	Y	P	R	A	T	L	L	G	R	P	G	T	G	K	T	V	T	L	R	K	L	W	E	L	Y	K	D	K	T	T	A	R	F	V	Y	I	N	G	F	I	Y
Template Known Secondary structure		S		G	G	G	G	S	T	T				S			T	T																		S		B	S	S										T	T	S	S													T	T	S										T	T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.										.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.
Query Sequence		P	K	D	L	I	E	S	E	L	F	G	H	E	K	G	A	F	T	G	A	N	T	I	R	Q	.	.	.	.	.	.	.	.	.	G	R	F	E	Q	A	D	G	G	T	L	F	L	D	E	I	G	D	M	P	L	D	V	Q	T	R	L	L	R	V	L	A	D	G	Q	F	Y	R	V	G	G	Y	A	P	V	K
Query Conservation																											.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.	.	.
Template Sequence		R	N	F	T	A	I	I	G	E	I	A	R	S	L	N	I	P	F	P	R	R	G	L	S	R	D	E	F	L	A	L	L	V	E	H	L	R	E	R	D	L	Y	M	F	L	V	L	D	D	A	F	N	L	A	P	D	I	L	S	T	F	I	R	L	G	Q	E	A	D	K	.	.	.	.	.	.	.	L	G	A
Template Known Secondary structure			S													T					S	S																		T	T									T	G	G	G	S												T	T					.	.	.	.	.	.	.		S	S
Template Predicted Secondary structure																																																																								.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.								.	.	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		V	D	V	R	I	I	A	A	T	H	Q	N	L	E	Q	R	V	Q	E	G	K	F	R	E	D	L	F	H	R	L	N	V	I	R	V	H	L	P	P	L	R	E	R	R	E	D	I	P	R	L	A	R	H	F	L	Q	V	A	A	R	E	L	G	V	E	A	K	L	L	H	P	E	T	E	A	A	L	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence														.	.	.	.																									.	.																		.	.	.	.	.														.	.	.
Template Conservation														.	.	.	.																									.	.																		.	.	.	.	.
Template Sequence		F	R	I	A	L	V	I	V	G	H	N	D	.	.	.	.	A	V	L	N	N	L	D	P	S	T	R	G	I	M	G	K	Y	V	I	R	F	S	P	Y	.	.	T	K	D	Q	I	F	D	I	L	L	D	R	A	K	A	G	L	.	.	.	.	.	A	E	G	S	Y	S	E	D	I	L	Q	M	I	A	D	I
Template Known Secondary structure		B									S	S	T	.	.	.	.					T	S									T	T									.	.	B																B	.	.	.	.	.		T	T	S	S
Template Predicted Secondary structure														.	.	.	.																									.	.																		.	.	.	.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.					.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.			.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.						210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
							349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.				.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																								.	.	.
Query SS confidence		.	.	.	.	.																								.	.	.
Query Sequence		.	.	.	.	.	T	R	L	A	W	P	G	N	V	R	Q	L	E	N	T	C	R	W	L	T	V	M	A	.	.	.	A	G	Q	E	V	L	I	Q	D	L	P	G	E	L	F	E
Query Conservation		.	.	.	.	.																								.	.	.
Alig confidence		.	.	.	.	.																								.	.	.
Template Conservation
Template Sequence		T	G	A	Q	T	P	L	D	T	N	R	G	D	A	R	L	A	I	D	I	L	Y	R	S	A	Y	A	A	Q	Q	N	G	R	K	H	I	A	P	E	D	V	R	K	S	S	K	E
Template Known Secondary structure			S	B	S	S	T	T		T	T																					T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions