|   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | E | K | L | K | I | V | Y | R | P | L | Q | E | L | S | P | Y | A | H | N | A | R | T | H | S | T | E | Q | V | A | Q | L | V | E | S | I | K | Q | F | G | W | T | N | P | V | L | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
D | E | K | G | E | I | I | A | G | H | G | R | V | M | A | A | E | M | L | K | M | D | S | V |
Query Conservation |   |
  |   |   |   |   |
|   |   |
|
|
|   |   |
|   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |
|   |   |   |
|
|   |
| . | . | . | . | . | . | . | . | . |   |   |   |   |   |
|
|   |
|   |   |
|   |   |
|
|   |   |
|
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |   |
|
|
|   |   |
|   |
| . | . |
|   |   |   |   |   |
|
|   |   |
|   |   |
|   |   |
|
|   |   |   |
|   |   |   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|   |
|
|
|   |
|   |   |   |
|
|   |   |   |
|
Template Sequence |   |
G | R | I | A | A | V | H | N | V | P | L | S | V | L | I | R | . |
. |
P | L | P | S | V | L | D | P | A | K | V | Q | S | L | V | D | T | I | R | E | D | P | D | S | V | P | P | I | D | V | L | W | I | K | G | A | Q | G | G | D | Y | F | Y | S | F | G | G | C | H | R | Y | A | A | Y | Q | Q | L | Q | R | E | T | I |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |  | G | G | G |  |  |
| . | . |
| S |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| G | G | G | S |
|
|  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |
|
| S |
|  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |
|
|  |  |  |
|
|
| . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
36 | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | |
|
. | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . |
  |
  |   |
73 | . | . | . | . | . | . | 80 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | V | I | V | L | S | G | L | T | D | E | Q | K | Q |
Query Conservation |   |
|   |   |
|   |   |   |   |
|
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |   |   |   |   |   |   |
|   |   |
Template Sequence |   |
P | A | K | L | V | Q | S | T | L | S | D | L | R | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
114 | . | . | . | . | . | 120 | . | . | . | . | . | . | . |
  |