Return to main results Retrieve Phyre Job Id

Job DescriptionQ79E92
Confidence84.49%DateThu Jan 5 12:37:38 GMT 2012
Rank138Aligned Residues44
% Identity9%Templated2p4wa1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain PF1790-like
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50
Predicted Secondary structure 









Query SS confidence 











































Query Sequence  PEEFKTEAVKQVVDLGYSVASVATRLDITTHSLYAWIKKYGPDS
Query Conservation 
 


  

    
 
 
  


   


  

  
 
      
Alig confidence 











































Template Conservation      
  

  
        


  
  
   
  

  
   
Template Sequence  GNETRRRILFLLTKRPYFVSELSRELGVGQKAVLEHLRILEEAG
Template Known Secondary structure  SS
T

TT
Template Predicted Secondary structure 











Template SS confidence 











































   13......20.........30.........40.........50......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions