Job Description Q79E92 Confidence 86.81% Date Thu Jan 5 12:37:38 GMT 2012 Rank 109 Aligned Residues 81 % Identity 14% Template c3qaoA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:merr-like transcriptional regulator; PDBTitle: the crystal structure of the n-terminal domain of a merr-like2 transcriptional regulator from listeria monocytogenes egd-e Resolution 1.87 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.																																										.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	S	V	A	S	V	A	T	R	L	D	I	T	T	H	S	L	Y	A	W	I	K	K	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	P	D	S	S	T	N	K	E	Q	S	D	A	Q	A
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		X	Q	I	K	E	L	A	E	L	T	G	V	S	V	R	T	L	H	H	Y	D	K	I	G	L	L	V	P	Q	K	D	D	W	N	G	Y	R	I	Y	S	E	K	D	V	D	K	L	Q	Q	I	L	F	F	K	E	L	D	F	P	L	K	K	I	Q	Q	I	L	D	D	P	L	F	D	K	N	V	A	L	D	X
Template Known Secondary structure		B																						T	T	S	S						T	T	T					B																	T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	R	R	L	Q	K	E	L	K	R	V	T	D	E	R	D	I	L	K	K	A	A	V	D	S	I	C	Q	C	N	T	P	F	N	Y	L	F	R	C	F	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	R	H	L	L	I	E	K	K	Q	R	I	E	T	X	L	A	T	L	D	L	T	I	K	N	E	K	G	E	I	T	X	T	N	K	E	K	F	T	G	F	D
Template Known Secondary structure																												T	T	S									T	T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions