Return to main results Retrieve Phyre Job Id

Job DescriptionQ79E92
Confidence81.40%DateThu Jan 5 12:37:38 GMT 2012
Rank167Aligned Residues34
% Identity12%Templatec3ivpD_
PDB info PDB header:dna binding proteinChain: D: PDB Molecule:putative transposon-related dna-binding protein; PDBTitle: the structure of a possible transposon-related dna-binding protein2 from clostridium difficile 630.
Resolution2.02 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40..
Predicted Secondary structure 






Query SS confidence 

































Query Sequence  EFKTEAVKQVVDLGYSVASVATRLDITTHSLYAW
Query Conservation 


  

    
 
 
  


   


  

  
Alig confidence 

































Template Conservation   

  

  
   



 


   


   

  
Template Sequence  ALGLAIKEARKKQGLTREQVGAXIEIDPRYLTNI
Template Known Secondary structure  TT

TS
Template Predicted Secondary structure 






Template SS confidence 

































   12.......20.........30.........40.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions