Job Description Q79E92 Confidence 91.52% Date Thu Jan 5 12:37:38 GMT 2012 Rank 51 Aligned Residues 68 % Identity 6% Template c3gp4B_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator, merr family; PDBTitle: crystal structure of putative merr family transcriptional regulator2 from listeria monocytogenes Resolution 1.85 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.																																																.	.	.	50	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	S	V	A	S	V	A	T	R	L	D	I	T	T	H	S	L	Y	A	W	I	K	K	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	P	D	S	S	T	N	K	E
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	N	I	K	E	A	S	E	K	S	G	V	S	A	D	T	I	R	Y	Y	E	R	I	G	L	I	P	P	I	H	R	N	E	S	G	V	R	K	F	G	A	E	D	L	R	W	I	L	F	T	R	Q	M	R	R	A	G	L	S	I	E	A	L	I	D	Y	L	A	L	F	R	E	G	E	H	T	L	E	A	R
Template Known Secondary structure		B										T	S												T	S	S							T	T	S				B																	T	T																	G	G	G
Template Predicted Secondary structure
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	D	A	Q	A	E	I	R	R	L	Q	K	E	L	K	R	V	T	D	E	R	D	I	L	K	K	A	A	V	D	S	I	C	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	E	L	L	K	K	Q	R	I	E	L	K	N	R	I	D	V	M	Q	E	A	L	D	R	L	D	F	K	I	D	N	Y	D	T	H
Template Known Secondary structure																																				T
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions