Job Description Q79E92 Confidence 92.97% Date Thu Jan 5 12:37:38 GMT 2012 Rank 38 Aligned Residues 82 % Identity 13% Template c2zhhA_ PDB info PDB header:transcription Chain: A: PDB Molecule:redox-sensitive transcriptional activator soxr; PDBTitle: crystal structure of soxr Resolution 3.20 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.																																				.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	S	V	A	S	V	A	T	R	L	D	I	T	T	H	S	L	Y	A	W	I	K	K	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	P	D	S	S	T	N	K	E	Q	S	D	A	Q	A	E	I	R	R	L	Q
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	T	P	G	E	V	A	K	R	S	G	V	A	V	S	A	L	H	F	Y	E	S	K	G	L	I	T	S	I	R	N	S	G	N	Q	R	R	Y	K	R	D	V	L	R	Y	V	A	I	I	K	I	A	Q	R	I	G	I	P	L	A	T	I	G	E	A	F	G	V	T	L	S	A	K	E	W	K	Q	L	S	S
Template Known Secondary structure												T	S											T	T	S	S						T	T	T						T	T														T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	L	K	R	V	T	D	E	R	D	I	L	K	K	A	A	V	D	S	I	C	Q	C	N	T	P	F	N	Y	L	F	R	C	F	E	L	Q
Query Conservation
Alig confidence																																				.
Template Conservation																																				.
Template Sequence		Q	W	R	E	E	L	D	R	R	I	H	T	L	V	A	L	R	D	E	L	D	G	C	I	G	C	G	C	L	S	R	S	D	C	.	P	L	R
Template Known Secondary structure																																T	T	T		.	G	G	G
Template Predicted Secondary structure																																				.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions