Job Description Q79E92 Confidence 98.09% Date Thu Jan 5 12:37:38 GMT 2012 Rank 3 Aligned Residues 93 % Identity 16% Template c1hlvA_ PDB info PDB header:dna binding protein/dna Chain: A: PDB Molecule:major centromere autoantigen b; PDBTitle: crystal structure of cenp-b(1-129) complexed with the cenp-2 b box dna Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.													.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.																							.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.																							.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	G	K	R	Y	P	E	E	F	K	T	E	A	V	K	Q	V	V	D	L	G	.	Y	S	V	A	S	V	A	T	R	L	D	I	T	T	H	S	L	Y	A	W	I	K	.	.	.	.	.	.	.	.	.	.	.	.	K	Y	G	P	D	S	S	T	N	K	E	Q	S	D	A	Q	A	E	I	R	R	L	Q	K
Query Conservation																							.																							.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.																							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	R	R	Q	L	T	F	R	E	K	S	R	I	I	Q	E	V	E	E	N	P	D	L	R	K	G	E	I	A	R	R	F	N	I	P	P	S	T	L	S	T	I	L	K	N	K	R	A	I	L	A	S	E	R	K	Y	G	V	A	S	T	C	R	K	T	N	K	L	S	P	Y	D	K	L	E	G	L	L	I	A
Template Known Secondary structure		S	S																			T	T	S										T												T												G	G	G	G	G	T								T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		69	70	.	.	.	.						.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure								.	.	.	.	.
Query SS confidence								.	.	.	.	.
Query Sequence		E	L	K	R	V	T	.	.	.	.	.	D	E	R	D	I	L	K	K	A	A	V	D	S	I	C	Q	C	N	T	P
Query Conservation								.	.	.	.	.
Alig confidence								.	.	.	.	.
Template Conservation
Template Sequence		W	F	Q	Q	I	R	A	A	G	L	P	V	K	G	I	I	L	K	E	K	A	L	R	I	A	E	E	L	G	M	D
Template Known Secondary structure							G	G	G	T																				T		T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions