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18 | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
N | T | M | V | A | H | L | G | I | V | Y | T | R | L | G | D | D | V | L | E | A | E | M | P | V | D | T | R | T | H | Q | P | F | G | L | L | H | G | G | A | S | A | A | L | A | E | T | L | G | S | M | A | G | F | M | M | T | R | D | G | Q | C | V | V | G | T | E | L | N | A | T | H | H | R | P | V | S | E | G | K |
Query Conservation |   |
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|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
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Template Conservation |   |
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|   |   |   |   |   |   |   |   |   |   |   |   |   |
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|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
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|   |
Template Sequence |   |
S | A | Y | S | E | L | V | G | L | D | P | V | S | L | G | D | G | V | A | E | V | R | L | P | X | A | A | H | L | R | N | R | G | G | V | X | H | G | G | A | L | F | S | L | X | D | V | T | X | G | L | A | C | S | S | S | H | G | F | D | R | Q | S | V | T | L | E | C | K | I | N | Y | I | R | A | V | A | D | G | E |
Template Known Secondary structure |   |
|  |  |  |  |  |  | T |
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| S | S |  |  |  |  |  |  |  |
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| G | G | G | B |
| T | T | S | S | B |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |
| S |
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| S | S |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
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Template SS confidence |   |
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  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . |
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  |   |
98 | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |
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Query SS confidence |   |
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Query Sequence |   |
V | R | G | V | C | Q | P | L | H | L | G | R | Q | N | Q | S | W | E | I | V | V | F | D | E | Q | G | R | R | C | C | T | C | R | L | G | T | A | V | L |
Query Conservation |   |
|   |
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|   |   |   |   |   |   |
|   |
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|   |   |   |   |
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Alig confidence |   |
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| . |
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Template Conservation |   |
|   |   |   |
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|   |   |   |   |   |   |   |   |
|   |   |   | . |
|   |
|   |
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|   |   |
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Template Sequence |   |
V | R | C | V | A | R | V | L | H | A | G | R | R | S | L | V | V | E | A | E | V | R | Q | G | . |
D | K | L | V | A | K | G | Q | G | T | F | A | Q | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  | T | . | T |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |
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Template SS confidence |   |
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  |   |
92 | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | |
. | . | . | . | 120 | . | . | . | . | . | . | . | . | . |
  |