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7 | . | . | 10 | . | . | . | . | . | . | . | . | |
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. | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | |
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. | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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|  |  |  |  |  |  |  |
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| . | . |
|  |  |  |  |
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|  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |
|  |  |  |  |
| . | . |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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| . | . | . | . | . |
Query SS confidence |   |
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| . |
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| . |
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| . |
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. |
. |
Query Sequence |   |
L | T | L | D | E | L | N | A | T | S | D | N | . |
. |
T | M | V | A | H | L | G | I | V | Y | T | R | L | G | D | D | V | L | E | A | E | M | P | V | D | T | R | T | H | Q | . |
. |
P | F | G | L | L | H | G | G | A | S | A | A | L | A | E | T | L | G | S | M | A | G | F | M | M | T | R | D | G | . |
. |
. |
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. |
Query Conservation |   |
  |   |   |
|   |
|   |   |   |   |   |   | . | . |   |   |   |   |   |
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|   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
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| . | . |   |   |
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|   |
|   |   |   |   |   |   |   |   | . | . | . | . | . |
Alig confidence |   |
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| . | . |
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| . | . | . | . | . |
Template Conservation |   |
  |   |
|   |   |   |   |   |   |   |   |   |   |   |
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|   |   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
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|   |
|   |
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|   |
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
V | L | F | S | A | V | N | E | I | F | E | E | K | I | P | F | N | K | I | I | G | L | K | V | R | F | I | S | P | E | Q | V | K | L | S | F | E | X | R | D | E | L | I | G | N | A | I | R | R | X | L | Y | G | G | V | I | S | S | A | I | D | X | T | A | G | L | A | A | F | X | G | F | Q | E | K | X | S | G | K | P |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T | S |
| G | G | G | G | T |  |  |  |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  | S | S |
|
| T | T |
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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| S |
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Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
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Template SS confidence |   |
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  |   |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . |
  |
  |   |
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78 | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
. |
. |
. |
. |
. |
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. |
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Query Sequence |   |
. |
. |
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. |
Q | C | V | V | G | T | E | L | N | A | T | H | H | R | P | V | S | E | G | K | V | R | G | V | C | Q | P | L | H | L | G | R | Q | N | Q | S | W | E | I | V | V | F | D | E | Q | G | R | R | C | C | T | C | R | L | G | T | A | V | L |
Query Conservation |   |
. | . | . | . | . | . | . | . |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |   |   |
|
|   |   |   |   |   |   |
|   |
|   |
|   |   |
|   |
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|   |   |   |   |
|   |   |
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Alig confidence |   |
. | . | . | . | . | . | . | . |
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Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |
|   |   |
|   |
|   |   |   |   |   |
|   |
|   |
|   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |
|   |
|   |   |
|   |
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|
|   |   |   |   |
|   |   |
|   |
Template Sequence |   |
X | E | E | K | L | A | X | I | G | R | L | S | T | X | S | L | H | V | E | Y | L | R | P | G | L | G | R | E | F | V | C | T | G | Y | N | V | R | T | G | N | K | V | A | V | I | R | T | E | L | X | N | D | Q | D | E | L | I | A | V | G | S | V | S | Y | I | L | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | G | G | G |  |  |  |  |  |  |  |  |  |  | S | S |
|
|
|
| S |  |  |  |  |  |  |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
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|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
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|  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
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  |   |
90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . |
  |