 |
Job Description | P0A8Y8 | Confidence | 99.76% | Date | Thu Jan 5 11:09:00 GMT 2012 |
Rank | 33 | Aligned Residues | 109 |
% Identity | 15% | Template | c2prxB_ |
PDB info |
PDB header:hydrolase | Chain: B: PDB Molecule:thioesterase superfamily protein; |
PDBTitle: crystal structure of thioesterase superfamily protein (zp_00837258.1)2 from shewanella loihica pv-4 at 1.65 a resolution
|
Resolution | 1.50 Å |
|
 |
  |   |
17 | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | N | T | M | V | A | H | L | G | I | V | Y | T | R | L | G | D | D | V | L | E | A | E | M | P | V | D | T | R | T | H | Q | P | F | G | L | L | H | G | G | A | S | A | A | L | A | E | T | L | G | S | M | A | G | F | M | M | T | R | D | G | Q | C | V | V | G | T | E | L | N | A | T | H | H | R | P | V | S | E | G |
Query Conservation |   |
  |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|   |   |   |   |   |
|   |   |
|   |   |
|
|
|   |
|   |
|
|   |
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|
|   |   |   |   | . |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
| . |
|   |
|
|
|
|   |
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |
|
|   |   |
|   |
|   |
|
|   |
|
|   |   |
|
Template Sequence |   |
Q | D | A | Y | S | H | C | Y | G | L | K | S | Y | W | . |
R | G | E | Q | T | I | A | H | F | X | P | K | P | F | H | T | A | P | . |
G | F | V | Y | G | G | L | I | A | S | L | I | D | C | H | G | T | G | S | A | S | A | A | A | Q | . |
R | P | R | F | V | T | A | A | L | N | I | D | Y | L | A | P | T | P | X | G |
Template Known Secondary structure |   |
T | T | T |
|
|
| S |
|
|
|
|
|  |  | . |  | T | T |  |  |  |  |  |  |
|
|
| T | T |
| B |
|
| . |
| B | B |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|  |  |  |  |  |  |  |  |  |  |
| S |
|
| B | T | T |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  | . |  |
|
|  |  |  |  |  |  |  |
|  |  |  |  |
|
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | |
. | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | |
. | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | |
. | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
  |
  |   |
|
97 | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
. |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
K | V | R | G | V | C | Q | P | L | H | L | G | R | Q | N | Q | S | W | E | I | V | V | F | D | E | Q | G | R | R | C | C | T |
Query Conservation |   |
. |   |
|   |
|   |
|   |   |   |   |   |
|
|   |   |   |   |   |   |
|   |
|   |
|   |   |
|   |
|
|
|   |
Alig confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|   |
|
|   |   |
|
|   |   |   |   |   |
|   |   |   |
|   |
|   |
|   |   |
|
|
|
Template Sequence |   |
V | E | L | E | L | V | G | E | I | K | E | V | R | K | V | V | V | E | I | A | L | S | A | L | C | A | R | G | H | X | V | A | V |
Template Known Secondary structure |   |
S |
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
111 | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|