Job Description P0A8Y8 Confidence 85.01% Date Thu Jan 5 11:09:00 GMT 2012 Rank 101 Aligned Residues 126 % Identity 15% Template c2cf2L_ PDB info PDB header:transferase Chain: L: PDB Molecule:fatty acid synthase, dh domain; PDBTitle: architecture of mammalian fatty acid synthase Resolution 4.30 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.												.	.	30	.	.								.	.	.	.	.	.	.	40	.	.	.	.	.							.	.	.	.	50	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.														.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.														.	.	.	.	.	.
Query Sequence		K	R	H	L	T	L	D	E	L	N	A	T	S	D	N	T	M	V	A	H	L	G	I	V	.	.	.	.	.	.	.	.	.	.	.	Y	T	R	L	G	.	.	.	.	.	.	.	D	D	V	L	E	A	E	M	P	V	D	T	R	.	.	.	.	.	.	T	H	Q	P	F	G	L	L	H	G	G	A	S	A
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.														.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.														.	.	.	.	.	.
Template Conservation
Template Sequence		R	E	S	Y	T	K	E	D	L	L	A	S	G	R	G	E	L	F	G	A	K	G	P	Q	L	P	A	P	N	M	L	M	M	D	R	V	V	K	M	T	E	T	G	G	N	F	D	K	G	Y	V	E	A	E	L	D	I	N	P	D	L	W	F	F	G	C	H	F	I	G	D	P	V	M	P	G	C	L	G	L
Template Known Secondary structure			S		B											T	T	T	T		T	T	S						T	T	S				S							S	S		S	T	T	S	S											S		S						S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		1004	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110				.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure																																				.	.																		.	.	.
Query SS confidence																																				.	.																		.	.	.
Query Sequence		A	L	A	E	T	L	G	S	M	A	G	F	M	M	T	R	D	G	Q	C	V	V	G	T	E	L	N	A	T	H	H	R	P	V	.	.	S	E	G	K	V	R	G	V	C	Q	P	L	H	L	G	R	Q	.	.	.	N	Q	S	W	E	I	V	V	F	D	E	Q	G	R	R	C	C	T	C	R
Query Conservation																																				.	.																		.	.	.
Alig confidence																																				.	.																		.	.	.											.
Template Conservation																																																																				.
Template Sequence		D	A	M	W	Q	L	V	G	F	Y	L	G	W	L	G	G	E	G	K	G	R	A	L	G	V	G	E	V	K	F	T	G	Q	V	L	P	T	A	K	K	V	T	Y	R	I	H	F	K	R	I	V	N	R	R	L	I	M	G	L	A	D	G	E	V	L	V	.	D	G	R	L	I	Y	T	A	S
Template Known Secondary structure															T	T			S								S						S				T	T																S	S	S												.	T	T							S
Template Predicted Secondary structure																																																																				.
Template SS confidence
		1084	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.		1150	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions