Job Description P77783 Confidence 74.02% Date Thu Jan 5 12:32:48 GMT 2012 Rank 94 Aligned Residues 145 % Identity 10% Template d1vima_ SCOP info SIS domain SIS domain mono-SIS domain Resolution 1.36

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	A	L	D	T	I	S	D	N	L	R	R	I	L	K	D	Y	G	N	E	A	V	H	V	L	Y	G	T	G	V	D	G	G	N	I	T	N	S	N	V	P	Y	R	L	M	N	S	C	G	G	F	L	S	R	Y	G	S	Y	S	T	A	Q	I	S	A	A	M	S	Y	M	F	G	A	N	D	G	N	S	P
Query Conservation
Alig confidence															.	.	.	.	.	.								.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.								.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	E	T	V	G	E	M	I	K	L	I	D	S	.	.	.	.	.	.	A	R	S	I	F	V	I	.	.	.	G	A	G	R	S	G	Y	I	A	K	A	F	A	M	R	L	M	H	L	G	Y	T	V	Y	V	V	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	T
Template Known Secondary structure															.	.	.	.	.	.	S	S						.	.	.		S																	T	T						T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure															.	.	.	.	.	.								.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.							.	.	.	.	.	.	40				.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.																					.	70	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	D	I	A	N	T	K	L	V	V	M	F	G	N	N	P	A	E	T	R	M	S	G	G	G	V	T	Y	Y	V	E	Q	A	R	E	R	S	N	A	R	M	I	V	I	D	P	R	Y	N	D	T	A	A	G	R	E	D	E	W	L	P	I	R	P	G	T	D	G	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.																																																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.
Template Sequence		P	R	I	T	D	Q	D	V	L	V	G	I	S	.	.	.	.	.	.	G	S	G	E	T	T	S	V	V	N	I	S	K	K	A	K	D	I	G	S	K	L	V	A	V	T	G	K	R	D	S	S	L	A	K	M	A	D	V	V	M	V	V	K	G	K	M	K	Q	E	R	D	E	I	L	S	Q	L	A	P	L
Template Known Secondary structure						T	T								.	.	.	.	.	.	S	S	S																T								S		T	T	S							S							S	S		T	T										S	G	G
Template Predicted Secondary structure															.	.	.	.	.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.							.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
											284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	A	L	A	C	A	I	A	W	V	L	I	T	E	N	M	V	D	Q	P	F	L	D	K	Y	C	V	G	Y	D	E	K	T
Query Conservation		.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	T	M	F	E	L	T	A	M	I	F	L	D	A	L	V	A	E	I	M	M	Q	K	H	L	T	E	K	D	L	E	A	R	H	A	V	L	E	E	G	G
Template Known Secondary structure		G																							T										S			T	T	T
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions