Job Description P77783 Confidence 100.00% Date Thu Jan 5 12:32:48 GMT 2012 Rank 17 Aligned Residues 583 % Identity 25% Template d1dmra2 SCOP info Formate dehydrogenase/DMSO reductase, domains 1-3 Formate dehydrogenase/DMSO reductase, domains 1-3 Formate dehydrogenase/DMSO reductase, domains 1-3 Resolution 1.82

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		55	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.												.
Predicted Secondary structure																.																																																						.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.																																																						.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	W	S	S	C	T	V	N	C	G	S	R	C	L	.	L	R	L	H	V	K	D	D	T	V	Y	W	V	E	S	D	T	T	G	D	D	V	Y	G	N	H	Q	V	R	A	C	L	R	G	R	S	I	R	R	R	M	N	H	P	D	R	L	K	Y	P	M	K	R	.	.	.	.	.	.	.	.	.	.	.	V
Query Conservation																.																																																						.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.							.																			.	.	.	.													.	.	.	.																.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.																										.	.	.	.													.	.	.	.
Template Sequence		L	A	N	G	T	V	M	.	S	G	S	H	W	G	V	F	T	A	T	V	E	N	G	R	A	T	A	F	T	P	W	E	K	.	.	.	.	D	P	H	P	S	P	M	L	A	G	V	L	.	.	.	.	D	S	I	Y	S	P	T	R	I	K	Y	P	M	V	R	R	E	F	L	E	K	G	V	N	A	D	R
Template Known Secondary structure									.				T	T									T	T									T	T	.	.	.	.		S	S			T	T						.	.	.	.					S	T	T	B			S											G	G	G	S		G
Template Predicted Secondary structure									.																										.	.	.	.													.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.					.	.	.	.	.	40	.	.	.	.	.	.					.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.		.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		G	K	R	G	E	G	K	F	E	R	I	S	W	D	E	A	L	D	T	I	S	D	N	L	R	R	I	L	K	D	Y	G	N	E	A	V	H	V	L	Y	.	G	T	G	V	D	G	G	N	I	T	N	S	N	V	P	Y	R	L	M	N	S	C	G	G	F	L	S	R	Y	G	S	Y	S	T	A	Q	I	S	A
Query Conservation																																										.
Alig confidence																																										.
Template Conservation
Template Sequence		S	T	R	G	N	G	D	F	V	R	V	S	W	D	Q	A	L	D	L	V	A	A	E	V	K	R	V	E	E	T	Y	G	P	E	G	V	F	G	G	S	Y	G	W	K	S	P	G	R	L	H	N	C	T	T	L	L	R	R	M	L	T	L	A	G	G	Y	V	N	G	A	G	D	Y	S	T	G	A	A	Q	V
Template Known Secondary structure		G	G	T	T	S																												G	G	G													S	S															T			B				S		S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		202	.	.	.	.	.	.						.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.						240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure									.	.	.	.	.																																.	.	.	.	.
Query SS confidence									.	.	.	.	.																																.	.	.	.	.
Query Sequence		A	M	S	Y	M	F	G	.	.	.	.	.	A	N	D	G	N	S	P	D	D	I	A	N	T	K	L	V	V	M	F	G	N	N	P	A	E	T	R	M	S	G	G	.	.	.	.	.	G	V	T	Y	Y	V	E	Q	A	R	E	R	S	N	A	R	M	I	V	I	D	P	R	Y	N	D	T	A	A	G	R	E
Query Conservation									.	.	.	.	.																																.	.	.	.	.
Alig confidence									.	.	.	.	.																																.	.	.	.	.													.
Template Conservation																																																														.
Template Sequence		I	M	P	H	V	V	G	T	L	E	V	Y	E	Q	Q	T	A	W	P	V	L	A	E	N	T	E	V	M	V	F	W	A	A	D	P	I	K	T	S	Q	I	G	W	V	I	P	E	H	G	A	Y	P	G	L	E	A	L	K	A	K	.	G	T	K	V	I	V	I	D	P	V	R	T	K	T	V	E	F	F	G
Template Known Secondary structure							T	S	S			T	T	S			S										S						S							T	T			S	S	B				T												.	T								S	S									T
Template Predicted Secondary structure																																																														.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	W	L	P	I	R	P	G	T	D	G	A	L	A	C	A	I	A	W	V	L	I	T	E	N	M	V	D	Q	P	F	L	D	K	Y	C	V	G	Y	D	E	K	T	L	P	A	N	A	P	R	N	A	H	Y	K	A	Y	I	L	G	E	G	P	D	G	I	A	K	T	P	E	W	A	A	K	I	T	S	I
Query Conservation
Alig confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	E	H	I	T	P	K	P	Q	T	D	V	A	I	M	L	G	M	A	H	T	L	V	A	E	D	L	Y	D	K	D	F	I	A	N	Y	T	S	G	F	D	K	F	L	P	Y	L	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	E	T	D	S	T	P	K	T	A	E	W	A	E	G	I	S	G	V
Template Known Secondary structure									T	T																T	T		S																				T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T	S
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.														.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	E	K	I	I	Q	L	A	R	E	I	G	S	A	K	P	A	Y	I	C	Q	G	W	G	P	Q	R	H	S	N	G	E	Q	T	S	R	A	I	A	M	L	S	V	L	T	G	N	V	G	I	N	G	G	N	S	G	V	R	E	G	S	W	D	L	G	V	E	W	F	P	M	L	E	N	P	V	K	T	Q
Query Conservation
Alig confidence															.
Template Conservation															.
Template Sequence		P	A	E	T	I	K	E	L	A	R	L	F	E	.	S	K	R	T	M	L	A	A	G	W	S	M	Q	R	M	H	H	G	E	Q	A	H	W	M	L	V	T	L	A	S	M	L	G	Q	I	G	L	P	G	G	G	F	G	L	S	Y	H	Y	S	G	G	G	T	P	S	T	S	G	P	A	L	A	G	I	T	D
Template Known Secondary structure															.		S								S	G	G	G	S	S	T	T	T															T		T	T	S	T	T					S		T	T	S	T	T	T	T	S				S
Template Predicted Secondary structure															.
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.		.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
		432	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.															.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	S	V	F	T	W	T	D	A	I	D	H	G	T	E	M	T	A	T	R	D	G	V	R	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	K	L	D	V	P	I	K	F	L	W	C	Y	A	S	N	T	L	I	N	Q	H	G	D	I	N	H	T	H	E	V	L	Q	D	D	S	K	C	E	M
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.
Template Conservation																																																																.	.	.	.
Template Sequence		G	G	A	A	T	K	G	P	E	W	L	A	A	S	G	A	S	V	I	P	V	A	R	V	V	D	M	L	E	N	P	G	A	E	F	D	F	N	G	T	R	S	K	F	P	D	V	K	M	A	Y	W	V	G	G	N	P	F	V	H	H	Q	.	.	.	.	D	R	N	R	M	V	K	A	W	E	K	L	E	T
Template Known Secondary structure		S	G	G	G	S							S	S	S			S				G	G	G							S	T	T						T	T															S							S	S	.	.	.	.									G	G	G		S
Template Predicted Secondary structure																																																																.	.	.	.
Template SS confidence
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440					.	.	.	.	.	.	.	.	.	450	.	.	.	.
		498	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	G	I	D	H	F	M	T	A	S	A	K	Y	C	D	I	L	L	P	D	L	M	P	T	E	Q	E	D	L	I	S	H	E	S	A	G	N	M	G	Y	V	I	L	A	Q	P	A	T	S	A	K	F	E	R	K	P	I	Y	W	M	L	S	E	V	A	K	R	L	G	P	D	V	Y	Q	T	F	T	E	G
Query Conservation
Alig confidence																																							.
Template Conservation																																							.
Template Sequence		F	V	V	H	D	F	Q	W	T	P	T	A	R	H	A	D	I	V	L	P	A	T	T	S	Y	E	R	N	D	I	E	T	I	G	D	Y	S	.	N	T	G	I	L	A	M	K	K	I	V	E	P	L	Y	E	A	R	S	D	Y	D	I	F	A	A	V	A	E	R	L	G	K	G	A	E	F	T	E	G	K	D
Template Known Secondary structure							S	B							T		S					B			G	G	G	S								T	T	T	.											S				T	T		B													T	T							T	T
Template Predicted Secondary structure																																							.
Template SS confidence
		455	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.		.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.
		578	.			580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.		.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.
Predicted Secondary structure				.	.																																						.
Query SS confidence				.	.																																						.
Query Sequence		R	S	.	.	Q	H	E	W	I	K	Y	L	H	A	K	T	K	E	R	N	P	E	M	P	D	Y	E	E	M	K	T	T	G	I	F	K	K	K	C	P	E	.	E	H	Y	V	A	F	R	A	F	R	E	D	P	Q	A	N	P	L	K	T	P	S	G	K	I	E	I	Y	S	E	R	L	A	K	I	A	D	T
Query Conservation				.	.																																						.
Alig confidence				.	.																																						.																																					.	.
Template Conservation																																																																																.	.
Template Sequence		E	M	G	W	I	K	S	F	Y	D	D	A	A	K	Q	G	K	A	A	G	V	Q	M	P	A	F	D	A	F	W	A	E	G	I	V	E	F	P	V	T	D	G	A	D	F	V	R	Y	A	S	F	R	E	D	P	L	L	N	P	L	G	T	P	T	G	L	I	E	I	Y	S	K	N	I	E	K	M	G	.	.
Template Known Secondary structure																				T	T																				S	S	G	G	G			T	T							T	T	T	S			S	S	T	T	S	S			S	S								T	.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		534	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.
		655	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	E	L	K	K	D	E	I	I	H	P	L	P	A	Y	T	P	G	F
Query Conservation
Alig confidence		.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	Y	D	D	C	P	A	H	P	T	W	M	E	P	L
Template Known Secondary structure		.	.	.	.	.		T	T	S		S	S
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							612	.	.	.	.	.	.	.	620	.	.	.	.	.