Return to main results Retrieve Phyre Job Id

Job DescriptionP77783
Confidence71.09%DateThu Jan 5 12:32:48 GMT 2012
Rank97Aligned Residues52
% Identity13%Templated1cr5a1
SCOP infoDouble psi beta-barrel ADC-like Cdc48 N-terminal domain-like
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   700.........710.........720.........730.........740.........750.........
Predicted Secondary structure 























Query SS confidence 



























































Query Sequence  SYGNIDVLQQACPQEVWINPIDAQARGIRHGDTVRVFNNNGEMLIAAKVTPRILPGVTAI
Query Conservation         
       
 


 

  


  

 
 
 
  
 
   
 

  
 

 
  
Alig confidence 





















.....








...




















Template Conservation   
   
   




 



  
.....
    



...    
 

     
  
 
 
Template Sequence  KVSNCPNNSYALANVAAVSPND. . . . . FPNNIYIII. . . DNLFVFTTRHSNDIPPGTIGF
Template Known Secondary structure 


TTT
TTT.....S
SS
...TTT
TTS
TT
Template Predicted Secondary structure 





.....




...







Template SS confidence 



























































   30.........40.........50. ........60 .........70.........80.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions