Job Description P77783 Confidence 91.58% Date Thu Jan 5 12:32:48 GMT 2012 Rank 59 Aligned Residues 187 % Identity 12% Template c3knzA_ PDB info PDB header:sugar binding protein Chain: A: PDB Molecule:putative sugar binding protein; PDBTitle: crystal structure of putative sugar binding protein (np_459565.1) from2 salmonella typhimurium lt2 at 2.50 a resolution Resolution 2.50 Å

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		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	S	D	N	L	R	R	I	L	K	D	Y	G	N	E	A	V	H	V	L	Y	G	T	G	V	D	G	G	N	I	T	N	S	N	V	P	Y	R	L	M	N	S	C	G	G	F	L	S	R	Y	G	S	Y	S	T	A	Q	I	S	A	A	M	S	Y	M	F	G	A	N	D	G	N	S	P	D	D	I	A	N
Query Conservation
Alig confidence																							.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	D	L	W	R	A	A	Q	A	L	T	E	R	G	V	T	R	I	I	L	T	.	.	.	G	S	G	T	S	Y	H	G	A	L	T	A	R	T	F	X	Q	R	W	C	A	L	P	V	D	V	C	W	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	X	L	D	D	E	T	L	A	R	S
Template Known Secondary structure														T	T								.	.	.																					T	S							G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G									S
Template Predicted Secondary structure																							.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.				.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.																	.	.	.	70	.	.	.	.	.	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.								.	.	.	.	290	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.
Query Sequence		T	K	L	V	V	M	F	G	N	N	P	A	E	T	R	M	S	G	G	G	V	T	Y	Y	V	E	Q	A	R	E	R	S	N	A	R	M	I	V	I	D	P	R	Y	N	D	T	A	A	G	R	E	D	E	W	L	P	I	R	P	G	T	D	G	A	L	.	.	.	.	.	.	.	A	C	A	I	A	W	V	L
Query Conservation																																																																			.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.																																															.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.
Template Sequence		G	K	A	L	V	V	G	I	S	Q	G	G	G	S	.	.	.	.	.	L	S	T	L	A	A	X	E	R	A	R	N	V	G	H	I	T	A	S	X	A	G	V	A	P	A	T	I	D	R	A	A	D	Y	I	L	T	V	P	C	G	E	T	K	G	Y	H	C	T	V	L	N	L	X	L	L	A	L	A	V	A
Template Known Secondary structure			S								S	S	S			.	.	.	.	.													T	T								S	S	S	S		G	G	G	G	G		S											T
Template Predicted Secondary structure																.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.						.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	E	N	M	V	D	Q	P	F	L	D	K	Y	C	V	G	Y	D	E	K	T	L	P	A	N	A	P	R	N	A	H	Y	K	A	Y	I	L	G	E	G	P	D	G	I	A	K	T	P	E	W	A	A	K	I	T	S	I	P	A	E	K	I	I	Q	L	A	R	E	I	G	S	A	K	P	A	Y	I	C	Q
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template Sequence		G	Q	Q	Q	R	L	D	G	E	Q	R	R	S	L	L	L	R	X	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	F	N	H	L	P	A	L	V	T	A	S	Q	A	W	A	Q	T	N	A	L	A	L	R	D	.	S	A	D	I	R	L	T
Template Known Secondary structure				T	T		S															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			T						T	.		S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.																												.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210
		374	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	W	G	P	Q	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	P	A	T	L	F
Template Known Secondary structure				G	G	G
Template Predicted Secondary structure
Template SS confidence
		211	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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