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Job DescriptionP77783
Confidence100.00%DateThu Jan 5 12:32:48 GMT 2012
Rank10Aligned Residues714
% Identity23%Templatec2ivfA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:ethylbenzene dehydrogenase alpha-subunit; PDBTitle: ethylbenzene dehydrogenase from aromatoleum aromaticum
Resolution1.88 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   52.......60... ......70.........80.........90........ .100.........110.........120..
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Query Sequence  EKAVWSSCTVNC. . GSRCLLRLHVKDDTVYWVESDTTGDDVYGNHQVRA. . . . . . . CLRGRSIRRRMNHPDRLKYPMKRV
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Template Sequence  DKVNWGSHLNICWPQGSCKFYVYVRNGIVWREEQAAQ. . . . TPACNVDYVDYNPLGCQKGSAFNNNLYGDERVKYPLKRV
Template Known Secondary structure  S


S

SS




TT


....


SSTTS



S


TTGGGTTSTTB

S

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   75....80.........90.........100.........110. ........120.........130.........140.........150
 
   123......130.........140.........150.........160.........170.........180.........190.........200..
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Query Sequence  GKRGEGKFERISWDEALDTISDNLRRILKDYGNEAVHVLYGTGVDGGNITNSNVPYRLMNSCGGFLSRYGSYSTAQISAA
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Template Sequence  GKRGEGKWKRVSWDEAAGDIADSIIDSFEAQGSDGFILDAPHV. . HAGSIAWGAGFRMTYLMDGVSPDI. NVDIGDTYMG
Template Known Secondary structure  SSTTS



GGGG



S..TT
T
B
.T


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   151........160.........170.........180.........190... ......200.........210....... ..220.......
 
   203......210 .........220.........230.........240.........250.........260.........270.........280.
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Query Sequence  MSYMFGAN. DGNSPDDIANTKLVVMFGNNPAETRMSGGGVTYYVEQARERSNARMIVIDPRYNDTAAGREDEWLPIRPGT
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Template Sequence  AFHTFGKMHMGYSADNLLDAELIFMTCSNWSYTYPSS. . . YHFLSEARYK. GAEVVVIAPDFNPTTP. AADLHVPVRVGS
Template Known Secondary structure  S



B

GGGGGG
SS


TTT....T

SS

TTGG.G
S


TT
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   228.230.........240.........250.........260.... .....270.... .....280.........290 .........300..
 
   282.......290.........300........ .310.........320.......
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Query Sequence  DGALACAIAWVLITENMVDQPFLDKYC. . . . . . . . . . . . . . . . . . . . . . . . . . . VGYDEKTLPANAPRNAHYK. . . . . . .
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Template Sequence  DAAFWLGLSQVMIDEKLFDRQFVCEQTDLPLLVRMDTGKFLSAEDVDGGEAKQFYFFDEKAGSVRKASRGTLKLDFMPAL
Template Known Secondary structure  TT
S
BSTTSTTT
SB
BS

TT
TTTT
SS



SS



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   303......310.........320.........330.........340.........350.........360.........370.........380..
 
   328.330.........340.........350.........360.........370.........380.........390
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Query Sequence  . . . . . . . . . . . . . . . . . AYILGEGPDGIAKTPEWAAKITSIPAEKIIQLAREIGSAKPAYICQGWGPQRHSNGEQTSRAI
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Template Sequence  EGTFSARLKNGKTIQVRTVFEGLREHLKDYTPEKASAKCGVPVSLIRELGRKVAKKRTCSY. IGFSSAKSYHGDLMERSL
Template Known Secondary structure  S

TTS
GGGGS


S
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TTTTTBTT
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   383......390.........400.........410.........420.........430.........440... ......450.........460.
 
   391........400.........410.........420.........430.........
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Query Sequence  AMLSVLTGNVGINGGNSGVREGSWDLGVEWFPMLENPVKTQISVFTWTD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  FLAMALSGNWGKPGTGAFAWAYSDDNMVYLGVMSKPTAQGGMDELHQMAEGFNKRTLEADPTSTDEMGNIEFMKVVTSAV
Template Known Secondary structure  TT
SSSTT

S
B





SS
GGGTTT
TT

T
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   462.......470.........480.........490.........500.........510.........520.........530.........540.
 
   440.........450.........460.........470.........480.....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . AIDHGTEMTATRDGVRGKEKLDVPIKFLWCYASNTLINQHGDINHT
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Template Sequence  GLVPPAMWLYYHVGYDQLWNNKAWTDPALKKSFGAYLDEAKEKGWWTNDHIRPAPDKTPQVYMLLSQNPMRRKRSGAKMF
Template Known Secondary structure  T
SSTT
GGGS
TTSSS
TTSS
TTTS
S
TTS


S

STT
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   542.......550.........560.........570.........580.........590.........600.........610.........620.
 
   486...490.........500.........510.........520.........530.........540.........550.........560.....
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Query Sequence  HEVLQDDSKCEMIVGIDHFMTASAKYCDILLPDLMPTEQEDLISHESAGNMGYVILAQPATSAKFERKPIYWMLSEVAKR
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Template Sequence  PD. . VLFPKLKMIFALETRMSSSAMYADIVLPCAWYYEKHEMTTPCSGN. . PFFTFVDRSVAPPGECREEWDAIALILKK
Template Known Secondary structure  ..TTGGG
SSB

TTGGG
SB

TT



SSS..

S

STT
B
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   622. ......630.........640.........650.........660........ .670.........680.........690.......
 
   566. ..570.........580.........590.........600.........610........
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Query Sequence  LG. . . . . . . . . . . . . . . . . . . . . . . . . . . PDVYQTFTEGRSQHEWIKYLHAKTKERNPEMPDYEEMKTTGIFKKKCPEEH
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Template Sequence  VGERAAARGLTEFNDHNGRKRRYDELYKKFTMDGHLLTNEDCLKEMVDINRAV. GVFAKDYTYEKFKKEGQTRFLSMGTG
Template Known Secondary structure  TT


TTS
GGGTTTTT

ST.TSS
TT




S
TTS
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   698.700.........710.........720.........730.........740.........750 .........760.........770......
 
   619620.........630... ......640.... .....650.........660.........670.........680...
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Query Sequence  YVAFRAFREDPQANP. . . . . . . . . . . . . LKTPSGKIEIY. . SERLAKIADTWELKKDEIIHPLPAYTPGFDGWDDPLRKT
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Template Sequence  VSRYAHANEVDVTKPIYPMRWHFDDKKVFPTHTRRAQFYLDHDWYLEAG. . . . . . . . . . . ESLPTHKDT. . . . . PMVGGD
Template Known Secondary structure  T
S


TTS


S
S



SSTTSSB





T...........
SS





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TTSS
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   777..780.........790.........800.........810.........820..... ....830.... .....840
 
   684.....690.........700.........710.. .......720.........730.........740.........750.........760.
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Query Sequence  YPLQLTGFHYKARTHSSYGNIDVLQQACP. . QEVWINPIDAQARGIRHGDTVRVFNNNGEMLIAAKVTPRILPGVTAIGQ
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Template Sequence  HPFKITGGHPRVSIHSTHLTNSHLSRLHRGQPVVHMNSKDAAELGIKDGDMAKLFNDFADCEIMVRTAPNVQPKQCIVYF
Template Known Secondary structure 
S



SSSSTTTTTT
TTS
SS
TT

TT

SS
TTS
TT


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   841........850.........860.........870.........880.........890.........900.........910.........920
 
   762.......770.........780.........790.. ... ....800......
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Query Sequence  GAWLKADMFGDRVDHGGSINILTSHRPSPLA. . KGN. . . . . . . . . . . . . . . PSHSNLVQIEK
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Template Sequence  WDAHQYKGW. . . . . . . KPYDILLIGMPKPLHLAGGYEQFRYYFMNGSPAPVTDRGVRVSIKK
Template Known Secondary structure 

GGGSGGG.......

GGGG





GGGG

SBTTB

BTTB
S

S


BT
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   921........ 930.........940.........950.........960.........970.....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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