Job Description P77783 Confidence 50.42% Date Thu Jan 5 12:32:48 GMT 2012 Rank 119 Aligned Residues 176 % Identity 16% Template c2decA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:325aa long hypothetical protein; PDBTitle: crystal structure of the ph0510 protein from pyrococcus horikoshii ot3 Resolution 1.70 Å

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		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	L	D	T	I	S	D	N	L	R	R	I	L	K	D	Y	G	N	E	A	V	H	V	L	Y	G	T	G	V	D	G	G	N	I	T	N	S	N	V	P	Y	R	L	M	N	S	C	G	G	F	L	S	R	Y	G	S	Y	S	T	A	Q	I	S	A	A	M	S	Y	M	F	G	A	N	D	G	N	S	P	D
Query Conservation
Alig confidence																																			.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	G	I	I	K	A	D	K	V	F	N	K	V	K	D	K	I	S	L	P	N	R	I	L	Y	L	G	C	G	S	S	H	F	.	.	.	L	S	K	L	L	A	M	V	T	N	M	H	G	G	L	G	I	A	L	P	C	S	E	F	L	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	S	K	E	T	Y
Template Known Secondary structure															T	T	T					S							S	T					.	.	.												T	T	S													.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G	S
Template Predicted Secondary structure																																			.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.				.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70														.	.	.	.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.												.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	I	A	N	T	K	L	V	V	M	F	G	N	N	P	A	E	T	R	M	S	G	G	G	V	T	Y	Y	V	E	Q	A	R	E	R	S	N	A	R	M	I	V	I	D	P	R	Y	N	D	T	A	A	G	R	E	D	E	W	L	P	I	R	P	G	T	.	.	.	.	.	.	.	.	.	.	.	D	G	A	L
Query Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.																									.																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.																									.
Template Sequence		P	I	G	E	V	E	L	A	V	G	I	.	.	.	.	.	.	.	.	.	S	R	S	G	E	T	T	E	I	L	L	A	L	E	K	I	N	V	K	K	L	G	I	T	.	T	R	E	S	S	L	T	R	M	C	D	Y	S	L	V	V	P	A	I	E	E	S	V	V	M	T	H	S	F	T	S	F	Y	F	A
Template Known Secondary structure					S		S						.	.	.	.	.	.	.	.	.		S	S	S											T			S							.	S	S	S	S						S	S											S	S	S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.																									.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.										.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	C	A	I	A	W	V	L	I	T	E	N	M	V	D	Q	P	F	L	D	K	Y	C	V	G	Y	D	E	K	T	L	P	A	N	A	P	R	N	A	H	Y	K	A	Y	I	L	G	E	G	P	D	G	I	A	K	T	P	E	W	A	A	K	I	T	S	I	P	A	E	K	I	I	Q	L	A	R	E	I	G	S
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template Sequence		Y	L	Q	L	L	R	Y	S	Y	G	L	P	P	L	N	A	G	E	I	S	K	A	T	E	K	S	L	E	Y	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	Y	I	R	E	I	V	E	S	F	.	.
Template Known Secondary structure										T	T																		T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.																																							.	.	.	.	180	.	.	.	.	.
		366	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	P	A	Y	I	C	Q	G	W	G	P	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	F	Q	N	I	I	F	L	G	S	G	L	L
Template Known Secondary structure				S								T	T
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions