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Job DescriptionP77783
Confidence79.92%DateThu Jan 5 12:32:48 GMT 2012
Rank87Aligned Residues191
% Identity13%Templatec2amlB_
PDB info PDB header:transferaseChain: B: PDB Molecule:sis domain protein; PDBTitle: crystal structure of lmo0035 protein (46906266) from listeria2 monocytogenes 4b f2365 at 1.50 a resolution
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   137..140.........150.. .......160.........170.........180.........190.........200.........210
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Query Sequence  EALDTISDNLRRILKD. . . . . . YGNEAVHVLYGTGVDGGNITNSNVPYRLMNSCGGFLSRYGSYSTAQISAAMSYMFGAN
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Template Sequence  EXCRVILADFQTNAEKLESLVKNGAKEWLIL. . . . ATGSSLNAAQSAKYYIENLADVRITIEEPFNHLYY. . . . . . . . . .
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TT

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   14.....20.........30.........40.... .....50.........60.........70.........
 
   211........220.........230.........240.........250.........260.........270.........280
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Query Sequence  DGNSPDDIANTKLVVMFGNNPAETRMSGGGVTYYVEQARERSNARMIVIDPRYNDTAAGREDEWLPIRPG. . . . . . . . . .
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Template Sequence  . . . . EKLSSHLDLVIGISQ. . . . . SGQSTSTISALERVKKEASVPVVALTSDVTSEIAEFADITLDIGSGKERVGYVTKG
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TT


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B



S
TTSGGGGG
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S
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   80.........90.... .....100.........110.........120.........130.........140.........150
 
   281........290.........300.........310.........320.........330.........340.........350.......
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Query Sequence  . . . TDGALACAIAWVLITENMVDQPFLDKYCVGYDEKTLPANAPRNAHYKAYILGEGPDGIAKTPEWAAKITSIPAEKII
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Template Sequence  FTATVLTLXLTGLHFAYKTVQIDETRFNNEISAFSR. . . . . . . . . . . . . . . . . . . . . . . . . . . AIDAIPATIAETEAFYE
Template Known Secondary structure  TTSS
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   151........160.........170.........180...... ...190.........200...
 
   358.360.........370........
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Query Sequence  QLAREIGSAKPAYICQGWGPQ
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Template Sequence  RWQEEFAT. APKFTAIGYGPT
Template Known Secondary structure  TT.



TT
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   204.....210. ........220...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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