Job Description P77783 Confidence 79.92% Date Thu Jan 5 12:32:48 GMT 2012 Rank 87 Aligned Residues 191 % Identity 13% Template c2amlB_ PDB info PDB header:transferase Chain: B: PDB Molecule:sis domain protein; PDBTitle: crystal structure of lmo0035 protein (46906266) from listeria2 monocytogenes 4b f2365 at 1.50 a resolution Resolution 1.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.							.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																		.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.
Query Sequence		E	A	L	D	T	I	S	D	N	L	R	R	I	L	K	D	.	.	.	.	.	.	Y	G	N	E	A	V	H	V	L	Y	G	T	G	V	D	G	G	N	I	T	N	S	N	V	P	Y	R	L	M	N	S	C	G	G	F	L	S	R	Y	G	S	Y	S	T	A	Q	I	S	A	A	M	S	Y	M	F	G	A	N
Query Conservation																		.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.										.	.	.	.																																				.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.
Template Sequence		E	X	C	R	V	I	L	A	D	F	Q	T	N	A	E	K	L	E	S	L	V	K	N	G	A	K	E	W	L	I	L	.	.	.	.	A	T	G	S	S	L	N	A	A	Q	S	A	K	Y	Y	I	E	N	L	A	D	V	R	I	T	I	E	E	P	F	N	H	L	Y	Y	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																							T	T			S						.	.	.	.																				S	S															.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.					.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		D	G	N	S	P	D	D	I	A	N	T	K	L	V	V	M	F	G	N	N	P	A	E	T	R	M	S	G	G	G	V	T	Y	Y	V	E	Q	A	R	E	R	S	N	A	R	M	I	V	I	D	P	R	Y	N	D	T	A	A	G	R	E	D	E	W	L	P	I	R	P	G	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.																.	.	.	.	.
Template Sequence		.	.	.	.	E	K	L	S	S	H	L	D	L	V	I	G	I	S	Q	.	.	.	.	.	S	G	Q	S	T	S	T	I	S	A	L	E	R	V	K	K	E	A	S	V	P	V	V	A	L	T	S	D	V	T	S	E	I	A	E	F	A	D	I	T	L	D	I	G	S	G	K	E	R	V	G	Y	V	T	K	G
Template Known Secondary structure		.	.	.	.					T	T									S	.	.	.	.	.	S	S		B																							S		T	T	S	G	G	G	G	G		S						S						S	S	S		S
Template Predicted Secondary structure		.	.	.	.																.	.	.	.	.
Template SS confidence
						80	.	.	.	.	.	.	.	.	.	90	.	.	.	.						.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
					281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	T	D	G	A	L	A	C	A	I	A	W	V	L	I	T	E	N	M	V	D	Q	P	F	L	D	K	Y	C	V	G	Y	D	E	K	T	L	P	A	N	A	P	R	N	A	H	Y	K	A	Y	I	L	G	E	G	P	D	G	I	A	K	T	P	E	W	A	A	K	I	T	S	I	P	A	E	K	I	I
Query Conservation		.	.	.
Alig confidence		.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	T	A	T	V	L	T	L	X	L	T	G	L	H	F	A	Y	K	T	V	Q	I	D	E	T	R	F	N	N	E	I	S	A	F	S	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	D	A	I	P	A	T	I	A	E	T	E	A	F	Y	E
Template Known Secondary structure																				T	T	S	S															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.																												.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	A	R	E	I	G	S	A	K	P	A	Y	I	C	Q	G	W	G	P	Q
Query Conservation
Alig confidence										.
Template Conservation										.
Template Sequence		R	W	Q	E	E	F	A	T	.	A	P	K	F	T	A	I	G	Y	G	P	T
Template Known Secondary structure								T	T	.										T	T
Template Predicted Secondary structure										.
Template SS confidence
		204	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions