Return to main results Retrieve Phyre Job Id

Job DescriptionP33348
Confidence99.61%DateThu Jan 5 11:51:49 GMT 2012
Rank65Aligned Residues210
% Identity17%Templated1sxjc2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.85

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   53......60.........70....... ..80.........90.........100.... .....110.........120......
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Query Sequence  QNISRKVVISPSAVERMLVTLATGR. . GLMLVGEPGTAKSLLSELLATAISGDA. . . . GLTIQGGASTTEDQIKYGWNYA
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Template Sequence  PETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDF
Template Known Secondary structure 
SSGGG

S
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SSSSSTTS
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ST
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   21........30.........40.........50.........60.........70.........80.........90.........100
 
   127..130.........140.........150.........160.........170.........180.........190.........200......
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Query Sequence  LLINHGPSTEALVPAPLYQGMRDGKIVRFEEITRTPLEVQDCLLGMLSDRVMTGPELTGEASQLYAREGFNIIATANTRD
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Template Sequence  ASTRQIFSK. . . . . . . . . . . . . GFKLIILDEADAMTNAAQNALRRVIERYTKNT. . . . . . . . . . . . . . . . RFCVLANYAH
Template Known Secondary structure  S

SSS
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TTGGGS
TTTT................S
GG
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   101........ 110.........120.........130.........140. ........150.
 
   207..210.........220.........230.........240.........250.........260.........270.........280......
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Query Sequence  RGVNEMSAALKRRFDFETVFPIMDFAQELELVASASARLLAHSGIPHKVPDAVLELLVRTFRDLRANGEKKTSMDTLTAI
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Template Sequence  K. . . . LTPALLSQCTRFRFQP. LPQEAIERRIANVLVH. . . . . . EKLKLSPNAEKALIEL. . . . . . . . . . . . . . . . . . SN
Template Known Secondary structure  G....S
TTS


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   152 .......160........ .170.........180.... .....190.........200 ..
 
   287..290.........300.........310.........320
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Query Sequence  MSTAEAVNVAHAVGVRAWFLANRAGEPADLVECI
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Template Sequence  GDMRRVLNVLQSCKATLDNPDEDEISDDVIYECC
Template Known Secondary structure  T
TTTTTTTT
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T
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   203......210.........220.........230......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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