Job Description P33348 Confidence 99.62% Date Thu Jan 5 11:51:49 GMT 2012 Rank 60 Aligned Residues 214 % Identity 12% Template d1njfa_ SCOP info P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain Resolution 2.30

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.				.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure																						.	.	.
Query SS confidence																						.	.	.
Query Sequence		R	K	V	V	I	S	P	S	A	V	E	R	M	L	V	T	L	A	T	G	.	.	.	R	G	L	M	L	V	G	E	P	G	T	A	K	S	L	L	S	E	L	L	A	T	A	I	S	G	D	A	G	L	T	I	Q	G	G	A	S	T	T	E	D	Q	I	K	Y	G	W	N	Y	A	L	L	I	N	H	G	P
Query Conservation																						.	.	.
Alig confidence																						.	.	.																									.
Template Conservation																																																	.
Template Sequence		A	D	V	V	G	Q	E	H	V	L	T	A	L	A	N	G	L	S	L	G	R	I	H	H	A	Y	L	F	S	G	T	R	G	V	G	K	T	S	I	A	R	L	L	A	K	G	L	.	N	C	E	T	G	I	T	A	T	P	C	G	V	C	D	N	C	R	E	I	E	Q	G	R	F	V	D	L	I	E	I	D
Template Known Secondary structure		G	G	S		S														T	T				S							S	T	T	S	S													.			T	T		S		S	S			S		S									T			T	T
Template Predicted Secondary structure																																																	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.										.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.
Query Sequence		S	T	E	A	L	V	P	A	P	L	Y	Q	G	M	R	D	G	K	.	.	.	.	.	.	.	.	.	I	V	R	F	E	E	I	T	R	T	P	L	E	V	Q	D	C	L	L	G	M	L	S	D	R	V	M	T	G	P	E	L	T	G	E	A	S	Q	L	Y	A	R	E	G	F	N	I	I	A	T	A	N	T
Query Conservation																				.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	A	S	R	T	K	V	E	D	T	R	D	L	L	D	N	V	Q	Y	A	P	A	R	G	R	F	K	V	Y	L	I	D	E	V	H	M	L	S	R	H	S	F	N	A	L	L	K	T	L	E	E	P	P	E	H	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	F	L	L	A	T	T	D
Template Known Secondary structure		T	T		S	S	S										S				S		S	S	S	S	S							T	G	G	G	S														S			T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							S
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150																	.	.	.	.	.	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	R	G	V	N	E	M	S	A	A	L	K	R	R	F	D	F	E	T	V	F	P	I	M	D	F	A	Q	E	L	E	L	V	A	S	A	S	A	R	L	L	A	H	S	G	I	P	H	K	V	P	D	A	V	L	E	L	L	V	R	T	F	R	D	L	R	A	N	G	E	K	K	T	S	M	D	T	L	T
Query Conservation
Alig confidence					.	.	.	.																	.																		.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.																	.																		.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	Q	K	.	.	.	.	L	P	V	T	I	L	S	R	C	L	Q	F	H	L	K	A	.	L	D	V	E	Q	I	R	H	Q	L	E	H	I	L	N	E	E	.	.	.	.	.	.	H	I	A	H	E	P	R	A	L	Q	L	L	A	R	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		G	G	G	.	.	.	.	S						T	T	S								.																		.	.	.	.	.	.	T			B												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure					.	.	.	.																	.																		.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		159	160	.					.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.							.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	M	S	T	A	E	A	V	N	V	A	H	A	V	G	V	R	A	W	F	L	A	N	R	A	G	E	P	A	D	L	V	E	C	I
Query Conservation
Alig confidence																		.	.	.	.
Template Conservation																		.	.	.	.
Template Sequence		A	E	G	S	L	R	D	A	L	S	L	T	D	Q	A	I	.	.	.	.	A	S	G	D	G	Q	V	S	T	Q	A	V	S	A	M	L
Template Known Secondary structure		T	T	T														.	.	.	.			T	T	T	S	B
Template Predicted Secondary structure																		.	.	.	.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.					.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions