Return to main results Retrieve Phyre Job Id

Job DescriptionP33348
Confidence99.81%DateThu Jan 5 11:51:49 GMT 2012
Rank32Aligned Residues215
% Identity19%Templated1ixsb2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution3.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  RKVVISPSAVERMLVTLA. . . . . . . TGRGLMLVGEPGTAKSLLSELLATAISGDAGLTIQGGASTTEDQIKYGWNYALLI
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Template Sequence  DEYIGQERLKQKLRVYLEAAKARKEPLEHLLLFGPPGLGKTTLAHVIAHEL. GVNLRVTSGPAIEKPGDLAAILANSLE.
Template Known Secondary structure  GGS
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Query Sequence  NHGPSTEALVPAPLYQGMRDGKIVRFEEITRTPLEVQDCLLGMLSD. . RVMTGPELTGEASQLYAREGFNIIATANTRDR
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Template Sequence  . . . . . . . . . . . . . . . . . . . EGDILFIDEIHRLSRQAEEHLYPAMEDFVMDIVIGQGPAARTIRLELPRFTLIGATTRPGL
Template Known Secondary structure  ...................TT
TGGG

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   90.........100.........110.........120.........130.........140.........150
 
   208.210.........220.........230.........240.........250.........260.........270.........280.......
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Query Sequence  GVNEMSAALKRRFDFETVFPIMDFAQELELVASASARLLAHSGIPHKVPDAVLELLVRTFRDLRANGEKKTSMDTLTAIM
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Template Sequence  . . . . ITAPLLSRFGIVEHLEYYTPEELAQGVMRDARLL. . . . . . GVRITEEAALEIGRR. . . . . . . . . . . . . . . . . . SRG
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   151........160.........170.........180.... .....190......... 200..
 
   288.290.........300.........310.........320
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Query Sequence  STAEAVNVAHAVGVRAWFLANRAGEPADLVECI
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Template Sequence  TMRVAKRLFRRVRDFAQVAGEEVITRERALEAL
Template Known Secondary structure  STTS

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   203......210.........220.........230.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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