Job Description P33348 Confidence 99.81% Date Thu Jan 5 11:51:49 GMT 2012 Rank 31 Aligned Residues 243 % Identity 18% Template c3pvsA_ PDB info PDB header:recombination Chain: A: PDB Molecule:replication-associated recombination protein a; PDBTitle: structure and biochemical activities of escherichia coli mgsa Resolution 2.50 Å

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		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.				.	70	.	.	.	.	.	.	.			.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.										.	.
Query SS confidence																		.	.	.										.	.
Query Sequence		Q	N	I	S	R	K	V	V	I	S	P	S	A	V	E	R	.	.	.	M	L	V	T	L	A	T	G	R	.	.	G	L	M	L	V	G	E	P	G	T	A	K	S	L	L	S	E	L	L	A	T	A	I	S	G	D	A	G	L	T	I	Q	G	G	A	S	T	T	E	D	Q	I	K	Y	G	W	N	Y	A	L
Query Conservation																		.	.	.										.	.
Alig confidence																		.	.	.										.	.																								.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	E	N	L	A	Q	Y	I	G	Q	Q	H	L	L	A	A	G	K	P	L	P	R	A	I	E	A	G	H	L	H	S	M	I	L	W	G	P	P	G	T	G	K	T	T	L	A	E	V	I	A	R	Y	A	.	N	A	D	V	E	R	I	S	A	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				S	T	T	T			S						S	T	T	S									T										S	T	T	S	S												T	.	T								T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																							.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	N	H	G	P	S	T	E	A	L	V	P	A	P	L	Y	Q	G	M	R	D	G	K	I	V	R	F	E	E	I	T	R	T	P	L	E	V	Q	D	C	L	L	G	M	L	S	D	R	V	M	T	G	P	E	L	T	G	E	A	S	Q	L	Y	A	R	E	G	F	N	I	I	A	T	A	N	T	R	D	R
Query Conservation
Alig confidence		.																																		.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																																		.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	S	G	V	K	E	I	R	E	A	I	E	R	A	R	Q	N	R	N	A	G	R	R	T	I	L	F	V	D	E	V	H	R	F	.	.	.	.	.	.	A	F	L	P	H	I	E	D	G	T	I	T	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	A	T	T	E	N	P	S	F	E
Template Known Secondary structure		.																			T	T									T	T	T			.	.	.	.	.	.								T	T	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	S		G	G	G	S
Template Predicted Secondary structure		.																																		.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.							.	120	.	.	.	.	.	.	.	.	.	130	.																	.	.	.	.	.	.	.	.	140	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.		.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure																																														.
Query SS confidence																																														.
Query Sequence		G	V	N	E	M	S	A	A	L	K	R	R	F	D	F	E	T	V	F	P	I	M	D	F	A	Q	E	L	E	L	V	A	S	A	S	A	R	L	L	A	H	S	G	I	.	P	H	K	V	P	D	A	V	L	E	L	L	V	R	T	F	R	D	L	R	A	N	G	E	K	K	T	S	M	D	T	L	T	A	I
Query Conservation																																														.
Alig confidence		.	.	.	.																	.																								.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.																	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	L	N	S	A	L	L	S	R	A	R	V	Y	L	L	K	S	.	L	S	T	E	D	I	E	Q	V	L	T	Q	A	M	E	D	K	T	R	G	Y	G	G	Q	D	I	V	L	P	D	E	T	R	R	A	I	A	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	N
Template Known Secondary structure		.	.	.	.	S						T	T									.																	T	T	T	S	S	T	T	S	S															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.																	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
						149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.																			.	.
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310			.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.
Query SS confidence																										.	.
Query Sequence		M	S	T	A	E	A	V	N	V	A	H	A	V	G	V	R	A	W	F	L	A	N	R	A	.	.	G	E	P	A	D	L	V	E	C	I	A	G	T	I	V	K	D	N	E	E	D	R	A	R	L	R	R	Y	F	E	Q	R	V	A	T	H	K	E	A	H	W	Q	A	Y	Y	Q	A	R	H
Query Conservation																										.	.
Alig confidence																										.	.																																		.	.
Template Conservation																																																													.	.
Template Sequence		G	D	A	R	R	A	L	N	T	L	E	M	M	A	D	M	A	E	V	D	D	S	G	K	R	V	L	K	P	E	L	L	T	E	I	A	G	E	R	S	A	R	K	G	D	R	F	Y	D	L	I	S	A	L	H	K	S	V	R	.	.	G	S	A	P	D	A	A	L	Y	W	Y	A	R	I
Template Known Secondary structure		S																S		B		T	T	S														T																							.	.	T	T
Template Predicted Secondary structure																																																													.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.			.	.	.	.	.	270	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions