Job Description P33348 Confidence 99.24% Date Thu Jan 5 11:51:49 GMT 2012 Rank 91 Aligned Residues 176 % Identity 20% Template c3m6aC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:atp-dependent protease la 1; PDBTitle: crystal structure of bacillus subtilis lon c-terminal domain Resolution 3.40 Å

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		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.									.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.
Query Sequence		I	S	R	K	V	V	I	S	P	S	A	V	E	R	M	L	V	T	L	A	T	.	.	.	.	.	.	.	.	G	R	G	L	M	L	V	G	E	P	G	T	A	K	S	L	L	S	E	L	L	A	T	A	I	S	G	D	A	G	L	T	I	Q	G	G	A	S	T	T	E	D	Q	I	K	Y	G	W	N	Y	A
Query Conservation																							.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.																										.															.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																								.															.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	D	E	E	H	H	G	L	E	K	V	K	E	R	I	L	E	Y	L	A	V	Q	K	L	T	K	S	L	K	G	P	I	L	C	L	A	G	P	P	G	V	G	K	T	S	L	A	K	S	I	A	K	S	L	.	G	R	K	F	V	R	I	S	L	G	G	R	I	I	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							S	S																		S	S	S			S							S	S	S	S	S	S													.	T														.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																								.															.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.		.	.	.	.	.	.	.	.	380	.	.	.	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	I	N	H	G	P	S	T	E	A	L	V	P	A	P	L	Y	Q	G	M	R	D	G	K	I	V	R	F	E	E	I	T	R	T	P	L	E	V	Q	D	C	L	L	G	M	L	S	D	R	V	M	T	G	P	E	L	T	G	E	A	S	Q	L	Y	A	R	E	G	F	N	I	I	A	T	A	N	T	R	D
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.													.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.													.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	G	M	K	K	A	G	K	L	N	P	V	F	L	L	D	E	I	D	K	M	S	A	M	L	.	.	E	V	L	D	P	E	Q	N	S	S	F	S	.	.	.	.	D	H	Y	I	E	E	T	F	D	L	S	K	V	L	F	I	A	T	A	N	N	L	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T		S	S	S								S	S	S					G	.	.	G	G	T		T	T	T	T	T	B			.	.	.	.		S	S	S					B		S	S								S	S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.													.	.	.	.
Template SS confidence
																406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430			.	.	.	.	.	.	.	.	.	440	.	.					.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.					.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.
Query SS confidence																																																	.	.	.	.
Query Sequence		R	G	V	N	E	M	S	A	A	L	K	R	R	F	D	F	E	T	V	F	P	I	M	D	F	A	Q	E	L	E	L	V	A	S	A	S	A	R	L	L	A	H	S	G	I	P	H	.	.	.	.	K	V	P	D	A	V	L	E	L	L	V	R	T	F
Query Conservation																																																	.	.	.	.
Alig confidence			.	.	.	.												.																															.	.	.	.
Template Conservation			.	.	.	.												.
Template Sequence		T	.	.	.	.	I	P	G	P	L	R	D	R	M	E	I	.	I	N	I	A	G	Y	T	E	I	E	K	L	E	I	V	K	D	H	L	L	P	K	Q	I	K	E	H	G	L	K	K	S	N	L	Q	L	R	D	Q	A	I	L	D	I	I	R	Y	Y
Template Known Secondary structure		T	.	.	.	.	S											.																		T									T				G	G	G
Template Predicted Secondary structure			.	.	.	.												.
Template SS confidence
		475					.	.	.	.	480	.	.	.	.	.	.		.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions