Job Description P33348 Confidence 99.85% Date Thu Jan 5 11:51:49 GMT 2012 Rank 23 Aligned Residues 251 % Identity 18% Template c3f9vA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:minichromosome maintenance protein mcm; PDBTitle: crystal structure of a near full-length archaeal mcm: functional2 insights for an aaa+ hexameric helicase Resolution 4.35 Å

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		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.														.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	S	R	K	V	V	I	S	P	S	A	V	E	R	M	L	V	T	L	A	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	L	M	L	V	G	E	P	G	T	A	K	S	L	L	S	E	L	L	A	T	A	I	S	G	D	A	G	L	T	I	Q	G	G	A	S	T	T	E	D	Q	I	K	Y
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.	.
Template Sequence		I	A	P	S	I	Y	G	H	W	E	L	K	E	A	L	A	L	A	L	F	G	G	V	P	K	V	L	E	D	T	R	I	R	G	D	I	H	I	L	I	I	G	D	P	G	T	A	K	S	Q	M	L	Q	F	I	S	R	V	A	P	R	A	V	Y	T	T	G	K	G	S	T	A	A	.	.	.	.	.	.	.
Template Known Secondary structure		T	S	S	T	T	S										T	T	T	T	T							T	T	T	T					S								S	S			T							S	S	S	T	T		S							T	T		S	T	T	T	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	W	N	Y	A	L	L	I	N	H	G	P	S	T	E	A	L	V	P	A	P	L	Y	Q	G	M	R	D	G	K	I	V	R	F	E	E	I	T	R	T	P	L	E	V	Q	D	C	L	L	G	M	L	S	D	R	V	M	T	G	P	E	L	T	G	E	A	S	Q	L	Y	A	R	E	G	F	N	I	I	A	T
Query Conservation
Alig confidence																											.	.																																	.	.	.
Template Conservation																											.	.																																	.	.	.
Template Sequence		G	L	T	A	A	V	V	R	E	K	G	T	G	E	Y	Y	L	E	A	G	A	L	V	L	A	.	.	D	G	G	I	A	V	I	D	E	I	D	K	M	R	D	E	D	R	V	A	I	H	E	A	M	E	Q	Q	T	V	S	I	.	.	.	A	K	A	G	I	V	A	K	L	N	A	R	A	A	V	I	A	A
Template Known Secondary structure		T	S					S	S	G	G	G	T	S	S		S										.	.	S	S	S					T	T	T	T				S												S	S	S				.	.	.		S	S	S	S
Template Predicted Secondary structure																											.	.																																	.	.	.
Template SS confidence
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.			.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.				.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
		202	.	.	.	.	.	.	.	210										.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250																				.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	N	T	R	D	R	G	V	N	.	.	.	.	.	.	.	.	.	E	M	S	A	A	L	K	R	R	F	D	F	E	T	V	F	P	I	M	D	F	A	Q	E	L	E	L	V	A	S	A	S	A	R	L	L	A	H	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	P	H
Query Conservation											.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	N	P	K	F	G	R	Y	I	S	E	R	P	V	S	D	N	I	N	L	P	P	T	I	L	S	R	F	D	L	I	F	I	L	K	D	Q	P	G	E	Q	D	R	E	L	A	N	Y	I	L	D	V	H	S	G	K	S	T	K	N	I	I	D	I	D	T	L	R	K	Y	I	A	Y	A	R	K	Y	V	T	P
Template Known Secondary structure					T	T			S		T	T	S		S		T	T	T		S		S	S	S	G	G	G		S								T	T													T	T	T				S	S	S	S	T	T			T	T	T
Template Predicted Secondary structure
Template SS confidence
		447	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	P	D	A	V	L	E	L	L	V	R	T	F	R	D	L	R	A	N	G	E	K	K	T	S	M	D	T	L	T	A	I	M	S	T	A	E	A	V	N	V	A	H	A	V	G	V	R	A	W	F	L	A	N	R	A	G	E	P	A	D	L	V	E	C	I
Query Conservation
Alig confidence																										.	.	.
Template Conservation																										.	.	.
Template Sequence		K	I	T	S	E	A	K	N	L	I	T	D	F	F	V	E	M	R	K	K	S	S	E	T	.	.	.	P	D	S	P	I	L	I	T	P	R	Q	L	E	A	L	I	R	I	S	E	A	Y	A	K	M	A	L	K	A	E	V	T	R	E	D	A	E	R	A	I
Template Known Secondary structure							T									T	T	S	S		S			B		.	.	.	S	S	S		B		S	S	T	T	T	T	T												T	T	S	S			S	S
Template Predicted Secondary structure																										.	.	.
Template SS confidence
		527	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550				.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions