 |
Job Description | P33348 | Confidence | 96.07% | Date | Thu Jan 5 11:51:49 GMT 2012 |
Rank | 396 | Aligned Residues | 31 |
% Identity | 19% | Template | c2vsxA_ |
PDB info |
PDB header:translation/hydrolase | Chain: A: PDB Molecule:atp-dependent rna helicase eif4a; |
PDBTitle: crystal structure of a translation initiation complex
|
Resolution | 2.8 Å |
|
  |   |
67 | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | R | M | L | V | T | L | A | T | G | R | G | L | M | L | V | G | E | P | G | T | A | K | S | L | L | S | E | L | L | A |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |
|   |
|
|
|
|
|
|   |
|
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |   |
|
|   |
|   |   |   |
|
|   |
|
|
|
|
|
|
|
|
|   |   |   |
|
|   |
Template Sequence |   |
Q | R | A | I | M | P | I | I | E | G | H | D | V | L | A | Q | A | Q | S | G | T | G | K | T | G | T | F | S | I | A | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |
|
| T | T | S | S |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|