Job Description P33348 Confidence 98.76% Date Thu Jan 5 11:51:49 GMT 2012 Rank 97 Aligned Residues 136 % Identity 17% Template c2gxaA_ PDB info PDB header:replication/dna Chain: A: PDB Molecule:replication protein e1; PDBTitle: crystal structure of papillomavirus e1 hexameric helicase2 with ssdna and mgadp Resolution 3.15 Å

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		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	V	E	R	M	L	V	T	L	A	T	G	R	G	L	M	L	V	G	E	P	G	T	A	K	S	L	L	S	E	L	L	A	T	A	I	S	G	D	A	G	L	T	I	Q	G	G	A	S	T	T	E	D	Q	I	K	Y	G	W	N	Y	A	L	L	I	N	H	G	P	S	T	E	A	L	V	P	A	P	L
Query Conservation
Alig confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	A	L	K	L	W	L	K	G	I	P	K	K	N	C	L	A	F	I	G	P	P	N	T	G	K	S	M	L	C	N	S	L	I	H	F	L	G	G	S	V	L	S	F	A	N	H	K	S	H	F	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									T	T		T	T									S	S	S	S	S												T	T						T	T	S		T	T	S		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		414	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.
Predicted Secondary structure																																																																															.
Query SS confidence																																																																															.
Query Sequence		Y	Q	G	M	R	D	G	K	I	V	R	F	E	E	I	T	R	T	P	L	E	V	Q	D	C	L	L	G	M	L	S	D	R	V	M	T	G	P	E	L	T	G	E	A	S	Q	L	Y	A	R	E	G	F	N	I	I	A	T	A	N	T	R	D	R	G	V	N	E	M	S	A	A	L	K	R	R	F	.	D	F
Query Conservation																																																																															.
Alig confidence																																																																	.	.	.												.
Template Conservation																																																																	.	.	.
Template Sequence		L	A	S	L	A	D	T	R	A	A	L	V	D	D	A	T	H	A	C	W	R	Y	F	D	T	Y	L	R	N	A	L	D	G	Y	P	V	S	I	D	R	K	H	K	A	A	V	Q	I	K	A	P	P	L	L	V	T	S	N	I	D	V	Q	A	.	.	.	E	D	R	Y	L	Y	L	H	S	R	V	Q	T	F
Template Known Secondary structure		T	S	G	G	G	T		S						S												T	T						S	S							S	S	S															S	S		T	T	T	.	.	.		S	T	T					T	T
Template Predicted Secondary structure																																																																	.	.	.
Template SS confidence
		466	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.				.	530	.	.	.	.	.	.	.	.	.	540	.	.
		223	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	V	F	P	I	M	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	F	E	Q	P	C	T	D
Template Known Secondary structure					S
Template Predicted Secondary structure
Template SS confidence
		543	.	.	.	.	.	.	550

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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