Job Description P33348 Confidence 99.34% Date Thu Jan 5 11:51:49 GMT 2012 Rank 89 Aligned Residues 241 % Identity 14% Template c1w5sB_ PDB info PDB header:replication Chain: B: PDB Molecule:origin recognition complex subunit 2 orc2; PDBTitle: structure of the aeropyrum pernix orc2 protein (adp form) Resolution 2.4 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.												.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.									.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Query Sequence		I	S	R	K	V	V	I	S	P	S	A	V	E	R	M	L	V	T	L	.	.	.	.	.	.	.	.	.	.	.	A	T	G	R	G	L	M	L	V	G	E	P	G	T	A	K	S	L	L	S	E	L	L	A	T	A	I	S	.	.	.	.	.	.	.	.	G	D	A	G	L	T	I	Q	G	G	A	S	T	T
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	P	P	E	L	R	V	R	R	G	E	A	E	A	L	A	R	I	Y	L	N	R	L	L	S	G	A	G	L	S	D	V	N	M	I	Y	G	S	I	G	R	V	G	I	G	K	T	T	L	A	K	F	T	V	K	R	V	S	E	A	A	A	K	E	G	L	T	V	K	Q	A	Y	V	N	A	F	N	A	P	N
Template Known Secondary structure				S	S		S	S	S	S																	T													T	T			S	S	S																			T	T										G	G	G			S
Template Predicted Secondary structure
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.						.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160							.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.																			.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.																			.	.	.	.	.	.
Query Sequence		E	D	Q	I	K	Y	G	W	N	Y	A	L	L	I	N	H	G	P	S	T	E	A	L	V	P	A	P	.	.	.	.	.	L	Y	Q	G	M	R	D	G	K	I	V	R	F	E	E	I	T	R	.	.	.	.	.	.	T	P	L	E	V	Q	D	C	L	L	G	M	L	S	D	R	V	M	T	G	P	E	L	T
Query Conservation																													.	.	.	.	.																			.	.	.	.	.	.
Alig confidence																													.	.	.	.	.																			.	.	.	.	.	.																	.	.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.	.
Template Sequence		L	Y	T	I	L	S	L	I	V	R	Q	T	G	Y	P	I	Q	V	R	G	A	P	A	L	D	I	L	K	A	L	V	D	N	L	Y	V	E	N	H	Y	L	L	V	I	L	D	E	F	Q	S	M	L	S	S	P	R	I	A	A	E	D	L	Y	T	L	L	R	V	H	E	E	I	.	.	.	.	.	.	.	.
Template Known Secondary structure														T						T	T																		T									S	T					S		T	T	S										T					S	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	A	S	Q	L	Y	A	R	E	G	F	N	I	I	A	T	A	N	T	R	D	R	G	V	N	E	M	S	A	A	L	K	R	R	F	D	F	E	T	V	F	P	I	M	D	F	A	Q	E	L	E	L	V	A	S	A	S	A	R	L	L	A	H	S	G	I	P	H	K	V	P	D	A	V	L	E	L	L	V
Query Conservation
Alig confidence		.																																																										.	.	.	.
Template Conservation		.																																																										.	.	.	.
Template Sequence		.	P	S	R	D	G	V	N	R	I	G	F	L	L	V	A	S	D	V	R	A	L	S	Y	M	R	E	K	I	P	Q	V	E	S	Q	I	G	F	K	L	H	L	P	A	Y	K	S	R	E	L	Y	T	I	L	E	Q	R	A	.	.	.	.	E	L	G	L	R	D	T	V	W	E	P	R	H	L	E	L	I	S
Template Known Secondary structure		.			T	T	S													T															T	T		S																						.	.	.	.				B		G	G	G
Template Predicted Secondary structure		.																																																										.	.	.	.
Template SS confidence
			172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.					.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	F	R	D	L	R	A	N	G	E	K	K	T	S	M	D	T	L	T	A	I	M	S	T	A	E	A	V	N	V	A	H	A	V	G	V	R	A	W	F	L	A	N	R	A	G	E	P	A	D	L	V	E	C	I
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	V	Y	G	E	D	.	.	.	.	.	.	.	.	.	.	.	.	K	G	G	D	G	S	A	R	R	A	I	V	A	L	K	M	A	C	E	M	A	E	A	M	G	R	D	S	L	S	E	D	L	V	R	K	A	V
Template Known Secondary structure						G	G	.	.	.	.	.	.	.	.	.	.	.	.	G	T	S																			G	G	G	T		S	S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		247	.	.	250	.	.													.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions