Job Description P37329 Confidence 81.85% Date Thu Jan 5 11:55:15 GMT 2012 Rank 157 Aligned Residues 205 % Identity 15% Template d1wdna_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.94

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		28	.	30	.	.	.	.	.	.	.												.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	I	T	V	F	A	A	A	S	L	.	.	.	.	.	.	.	.	.	.	.	T	N	A	M	Q	D	I	A	T	Q	F	K	K	E	K	G	V	D	V	V	S	S	F	A	S	S	S	T	L	A	R	Q	I	E	A	G	A	P	A	D	L	F	I	S	A	D	Q	K	W	M	D	Y	A	V	D	K	K	A	I
Query Conservation												.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.																																																								.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		K	L	V	V	A	T	D	T	A	F	V	P	F	E	F	K	Q	G	D	L	Y	V	G	F	D	V	D	L	W	A	A	I	A	K	E	L	K	L	D	Y	E	L	K	P	M	D	F	S	G	I	I	P	A	L	Q	T	K	N	V	D	L	A	L	A	G	I	T	I	T	D	E	R	K	K	A	I	.	.	.	.
Template Known Secondary structure									S	S	B	T	T	T	B				T	T				S														T										G	G	G							T	T	S	S	S														T	T	S	.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	A	T	R	Q	T	L	L	G	N	S	L	V	V	V	A	P	K	A	S	V	Q	K	D	F	T	I	D	S	K	T	N	W	T	S	L	L	N	G	G	R	L	A	V	G	D	P	E	H	V	P	A	G	I	Y	A	K	E	A	L	Q	K	L	G	A	W	D	T	L	S	P	K	L	A	P	A	E	D	V
Query Conservation
Alig confidence		.	.																													.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																													.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	D	F	S	D	G	Y	Y	K	S	G	L	L	V	M	V	K	A	N	N	N	D	V	K	S	V	K	D	L	.	.	.	.	.	.	.	.	D	G	K	V	V	A	V	K	S	G	T	.	.	.	.	.	.	.	.	.	.	G	S	V	D	Y	A	K	A	N	I	K	T	K	D	L	R	Q	F	P	N	I
Template Known Secondary structure		.	.				S													T	T			S		S	S	S	T	T	T	.	.	.	.	.	.	.	.	T	T							T	T	S	.	.	.	.	.	.	.	.	.	.													S						S	S
Template Predicted Secondary structure		.	.																													.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.
Template SS confidence
				80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.									.	.	110	.	.	.	.	.	.	.	.											.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.			.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230			.	.		.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure																								.	.																																	.	.			.
Query SS confidence																								.	.																																	.	.			.
Query Sequence		R	G	A	L	A	L	V	E	R	N	E	A	P	L	G	I	V	Y	G	S	D	A	.	.	V	A	S	K	G	V	K	V	V	A	T	F	P	E	D	S	H	K	K	V	E	Y	P	V	A	V	V	E	G	H	N	N	.	.	A	T	.	V	K	A	F	Y	D	Y	L	K	G	P	Q	A	A	E	I	F	K	R
Query Conservation																								.	.																																	.	.			.
Alig confidence																								.	.																																	.	.			.
Template Conservation
Template Sequence		D	N	A	Y	M	E	L	G	T	N	R	A	D	A	V	L	H	D	T	P	N	I	L	Y	F	I	K	T	A	G	N	G	Q	F	K	A	V	G	D	S	L	E	A	Q	Q	Y	G	I	A	F	P	K	G	S	D	E	L	R	D	K	V	N	G	A	L	K	T	L	R	E	N	G	T	Y	N	E	I	Y	K	K
Template Known Secondary structure										T	T	S		S															T	T	T	T	T	T																			T	T																		T	S
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		252	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G	F	T	I	K
Query Conservation
Alig confidence			.
Template Conservation			.
Template Sequence		W	.	F	G	T	E
Template Known Secondary structure			.		S	S
Template Predicted Secondary structure			.
Template SS confidence
		220		.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions