|   |
28 | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | |
|
|
. | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | |
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|
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  | . | . | . |
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|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
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|
| . | . | . | . | . |
Query SS confidence |   |
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| . |
. |
. |
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| . |
. |
. |
. |
. |
Query Sequence |   |
K | I | T | V | F | A | A | A | S | L | T | N | A | M | Q | D | I | A | T | Q | F | K | K | E | K | G | V | D | V | V | S | S | F | A | S | S | S | T | L | A | R | Q | I | E | . |
. |
. |
A | G | A | P | A | D | L | F | I | S | A | D | Q | K | W | M | D | Y | A | V | D | K | K | A | I | D | T | A | . |
. |
. |
. |
. |
Query Conservation |   |
  |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
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|   |   |
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|   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . |
Alig confidence |   |
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| . |
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| . | . | . |
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| . | . | . | . | . |
Template Conservation |   |
|
|   |
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|
|   |   |   | . |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
D | I | T | V | Y | N | G | Q | Q | . |
K | E | A | A | T | A | V | A | K | A | F | E | Q | E | T | G | I | K | V | T | L | N | S | G | K | S | E | Q | L | A | G | Q | L | K | E | E | G | D | K | T | P | A | D | V | F | Y | T | E | Q | T | A | T | F | A | D | L | S | E | A | G | L | L | A | P | I | S | E | Q | T | I |
Template Known Secondary structure |   |
|  |  |  |  |  |
| S |
| . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  | G | G | G |
|
|
| S |  |  |  |  | S |
| G | G | G |  |  |  |  |  |  | T | T |
| B |
|
|
|
|  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |
|
|
|
| . |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |
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Template SS confidence |   |
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  |   |
1 | . | . | . | . | . | . | . | . | |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
  |
  |   |
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100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | |
|
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. | . | . | 160 |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |
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|  |  |  |  |  |
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|  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
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| . |
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. |
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Query Sequence |   |
. |
. |
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. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | R | Q | T | L | L | G | N | S | L | V | V | V | A | P | K | A | S | V | Q | K | D | F | T | I | D | S | K | T | N | W | T | S | L | L | N | G | G | R | L | A | V | G | D | P | E | H | V | P | A | G | I | Y | A | K | E | A | . |
. |
. |
. |
. |
L | Q | K | L |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   | . | . | . | . | . |   |   |   |   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . |
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| . | . | . | . | . |
|
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|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
Template Sequence |   |
Q | Q | T | A | Q | K | G | V | P | L | A | P | K | K | D | W | I | A | L | S | G | R | S | R | V | V | V | Y | D | H | T | K | L | S | E | K | D | M | E | K | S | V | L | D | Y | A | T | P | K | W | K | G | K | I | G | Y | V | S | T | S | G | A | F | L | E | Q | V | V | A | L | S | K | M | K | G | D | K | V | A | L |
Template Known Secondary structure |   |
 | T | T |
|
| T | T |
|
|
|
| T | T | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|
| G | G | G | S |
| S | S | G | G | G | G | G | S | G | G | G | T | T | T |  |  |  |
| T | T | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|  |  |  |
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|  |  |  |
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|  |  |
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|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
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  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . |
  |
  |   |
161 | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | |
|
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|
. | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . |
Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
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|
|  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |
Query SS confidence |   |
|
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| . |
. |
. |
. |
. |
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. |
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Query Sequence |   |
G | A | W | D | T | L | S | P | K | L | A | P | A | E | D | V | R | G | A | L | A | L | V | E | R | N | E | A | P | L | G | I | V | Y | G | S | D | A | V | A | S | K | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
V | K | V | V | A | T | F | P | E | D | S | H | K | K | V | E | Y | P | V | A | V | V | E | G | H | N | N | A |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |
Alig confidence |   |
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| . | . | . | . | . | . | . | . | . |
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|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
Template Sequence |   |
N | W | L | K | G | L | K | E | N | G | K | L | Y | A | K | N | S | V | A | L | Q | A | V | E | N | G | E | V | P | A | A | L | I | N | N | Y | Y | W | Y | N | L | A | K | E | K | G | V | E | N | L | K | S | R | L | Y | F | V | R | H | Q | D | P | G | A | L | V | S | Y | S | G | A | A | V | L | K | A | S | K | N | Q |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  | T | T | S |
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| G | G | G |
| S |  |  |  |  |
|
|
| T | T |
| G | G | G |
|  |  |  |  |  |  |  |  | B | T | T |
| S |
|  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
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|  |  |  |
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|  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |
|
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|  |
Template SS confidence |   |
|
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  |   |
160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . |
  |
  |   |
232 | |
. | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 | . |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |
Query SS confidence |   |
| . |
|
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|
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|
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|
Query Sequence |   |
T | . |
V | K | A | F | Y | D | Y | L | K | G | P | Q | A | A | E | I | F | K | R | Y | G | F | T | I |
Query Conservation |   |
  | . |
|   |   |
|
|   |
|
|   |
|   |
|   |
|   |   |   |   |   |   |
|
|   |   |
Alig confidence |   |
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
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|
|
Template Conservation |   |
|   |
|   |   |
|
|   |   |
|   |
|   |
|   |
|   |   |   |   |   |   |   |
|   |   |
Template Sequence |   |
A | E | A | Q | K | F | V | D | F | L | A | S | K | K | G | Q | E | A | L | V | A | A | R | A | E | Y |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | S |  |  |  |  |  |  |  |  |  |  | S |
|
|  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . |
  |