Job Description P37329 Confidence 89.48% Date Thu Jan 5 11:55:15 GMT 2012 Rank 155 Aligned Residues 211 % Identity 15% Template d1lsta_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.80

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.													.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	D	E	G	K	I	T	V	F	A	A	A	S	L	.	.	.	.	.	.	.	.	.	.	.	.	T	N	A	M	Q	D	I	A	T	Q	F	K	K	E	K	G	V	D	V	V	S	S	F	A	S	S	S	T	L	A	R	Q	I	E	A	G	A	P	A	D	L	F	I	S	A	D	Q	K	W	M	D	Y	A	V
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	L	P	Q	T	V	R	I	G	T	D	T	T	Y	A	P	F	S	S	K	D	A	K	G	E	F	I	G	F	D	I	D	L	G	N	E	M	C	K	R	M	Q	V	K	C	T	W	V	A	S	D	F	D	A	L	I	P	S	L	K	A	K	K	I	D	A	I	I	S	S	L	S	I	T	D	K	R	Q	Q	E
Template Known Secondary structure					S								S		B	T	T	T	B				T	T					S														T										G	G	G							T	T	S		S				S	S		B
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	K	A	I	D	T	A	T	R	Q	T	L	L	G	N	S	L	V	V	V	A	P	K	A	S	V	Q	K	D	F	T	I	D	S	K	T	N	W	T	S	L	L	N	G	G	R	L	A	V	G	D	P	E	H	V	P	A	G	I	Y	A	K	E	A	L	Q	K	L	G	A	W	D	T	L	S	P	K	L	A
Query Conservation
Alig confidence			.	.	.	.	.	.																												.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.																												.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.
Template Sequence		I	.	.	.	.	.	.	A	F	S	D	K	L	Y	A	A	D	S	R	L	I	A	A	K	G	S	P	I	Q	P	T	L	E	S	.	.	.	.	.	.	.	.	L	K	G	K	H	V	G	V	L	Q	G	S	T	Q	.	.	.	.	.	.	.	.	E	A	Y	A	N	D	N	W	R	T	K	G	V	D	V	V
Template Known Secondary structure			.	.	.	.	.	.				S		S	B										T	T					S	S				.	.	.	.	.	.	.	.		T	T							T	T	S			.	.	.	.	.	.	.	.								T	G	G	G	T
Template Predicted Secondary structure			.	.	.	.	.	.																												.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.
Template SS confidence
		81							.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.									.	110	.	.	.	.	.	.	.	.	.	120	.	.									.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.							.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.		.	.	.	.	.	.	.	240	.
Predicted Secondary structure																																				.	.	.	.	.	.																												.										.	.	.
Query SS confidence																																				.	.	.	.	.	.																												.										.	.	.
Query Sequence		P	A	E	D	V	R	G	A	L	A	L	V	E	R	N	E	A	P	L	G	I	V	Y	G	S	D	A	V	A	S	K	G	V	K	.	.	.	.	.	.	V	V	A	T	F	P	E	D	S	H	K	K	V	E	Y	P	V	A	V	V	E	G	H	N	N	A	T	.	V	K	A	F	Y	D	Y	L	K	.	.	.
Query Conservation																																				.	.	.	.	.	.																												.										.	.	.
Alig confidence																																				.	.	.	.	.	.																												.										.	.	.
Template Conservation
Template Sequence		A	Y	A	N	Q	D	L	I	Y	S	D	L	T	A	G	R	L	D	A	A	L	Q	D	E	V	A	A	S	E	G	F	L	K	Q	P	A	G	K	E	Y	A	F	A	G	P	S	V	K	D	K	K	Y	F	G	D	G	T	G	V	G	L	R	K	D	D	T	E	L	K	A	A	F	D	K	A	L	T	E	L	R
Template Known Secondary structure				S	S										T	T	S		S													T	T	T	S	G	G	G	T	T					S	S		B								S	S	B						T	T
Template Predicted Secondary structure
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
			242	.	.	.	.	.	.	.	250	.	.		.	.	.	.
Predicted Secondary structure		.												.
Query SS confidence		.												.
Query Sequence		.	G	P	Q	A	A	E	I	F	K	R	Y	.	G	F	T	I
Query Conservation		.												.
Alig confidence		.												.
Template Conservation
Template Sequence		Q	D	G	T	Y	D	K	M	A	K	K	Y	F	D	F	N	V
Template Known Secondary structure			T	T								T	T		S	S		T
Template Predicted Secondary structure
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions