Job Description P37329 Confidence 97.79% Date Thu Jan 5 11:55:15 GMT 2012 Rank 105 Aligned Residues 196 % Identity 12% Template d1ixca2 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 2.20

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		27	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure													.												.
Query SS confidence													.												.
Query Sequence		G	K	I	T	V	F	A	A	A	S	L	.	T	N	A	M	Q	D	I	A	T	Q	F	.	K	K	E	K	G	V	D	V	V	S	S	F	A	S	S	S	T	L	A	R	Q	I	E	A	G	A	P	A	D	L	F	I	S	A	D	Q	K	W	M	D	Y	A	V	D	K	K	A	I	D	T	A	T	R	Q	T	L
Query Conservation													.												.
Alig confidence													.												.																																		.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.	.
Template Sequence		G	E	L	S	V	A	Y	F	G	T	P	I	Y	R	S	L	P	L	L	L	R	A	F	L	T	S	T	P	T	A	T	V	S	L	T	H	X	T	K	D	E	Q	V	E	G	L	L	A	G	T	I	H	V	G	F	S	R	.	.	.	.	.	.	.	.	.	.	F	F	P	R	H	P	G	I	E	I	V	N	I
Template Known Secondary structure										S	G	G	G	G	T														T	T																				T	S		S					S	.	.	.	.	.	.	.	.	.	.						T	T
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.											.	.	150	.	.	.	.	.	.	.	.	.	160
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	N	S	L	V	V	V	A	P	K	A	S	V	Q	K	D	F	T	I	D	S	K	T	N	W	T	S	L	L	N	G	G	R	L	A	V	G	D	P	E	H	V	P	A	G	I	Y	A	K	E	A	L	Q	K	L	G	A	W	D	T	L	S	P	K	L	A	P	A	E	D	V	R	G	A	L	A	L	V	E
Query Conservation
Alig confidence																															.	.	.	.																												.	.
Template Conservation																															.	.	.	.																												.	.
Template Sequence		A	Q	E	D	L	Y	L	A	V	H	R	S	Q	S	G	K	F	G	K	T	C	K	L	A	D	L	R	A	V	.	.	.	.	E	L	T	L	F	P	R	G	G	R	P	S	F	A	D	E	V	I	G	L	F	K	H	A	G	I	E	.	.	P	R	I	A	R	V	V	E	D	A	T	A	A	L	A	L	T	X
Template Known Secondary structure												G	G	G	G	G	G	T		S				G	G	G	G	T	T		.	.	.	.								S	S	S	S													T	T			.	.								S	S
Template Predicted Secondary structure																															.	.	.	.																												.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.					190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.			.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		R	N	E	A	P	L	G	I	V	Y	G	S	D	A	V	A	S	K	G	V	K	V	V	A	T	F	P	E	D	S	H	K	K	V	E	Y	P	V	A	V	V	E	G	H	N	N	A	T	V	K	A	F	Y	D	Y	L
Query Conservation
Alig confidence											.	.
Template Conservation											.	.
Template Sequence		A	G	A	A	S	S	I	V	P	.	.	A	S	V	A	A	I	R	W	P	D	I	A	F	A	R	I	V	G	T	R	V	K	V	P	I	S	C	I	F	R	K	E	K	Q	P	P	I	L	A	R	F	V	E	H	V
Template Known Secondary structure		T	T	S		B					.	.					T	S			T	T									T	T											S	S	S
Template Predicted Secondary structure											.	.
Template SS confidence
		235	.	.	.	.	240	.	.	.			.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions