Job Description P37329 Confidence 99.55% Date Thu Jan 5 11:55:15 GMT 2012 Rank 66 Aligned Residues 232 % Identity 12% Template d1eu8a_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.90

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		25	.	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.							70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure															.	.															.																			.	.	.	.	.	.
Query SS confidence															.	.															.																			.	.	.	.	.	.
Query Sequence		D	E	G	K	I	T	V	F	A	A	A	S	L	.	.	T	N	A	M	Q	D	I	A	T	Q	F	K	K	E	.	K	G	V	D	V	V	S	S	F	A	S	S	S	T	L	A	R	Q	.	.	.	.	.	.	I	E	A	G	A	P	A	D	L	F	I	S	A	D	Q	K	W	M	D	Y	A	V	D	K	K	A
Query Conservation															.	.															.																			.	.	.	.	.	.
Alig confidence															.	.															.																			.	.	.	.	.	.
Template Conservation
Template Sequence		E	E	G	K	I	V	F	A	V	G	G	A	P	N	E	I	E	Y	W	K	G	V	I	A	E	F	E	K	K	Y	P	G	V	T	V	E	L	K	R	Q	A	T	D	T	E	Q	R	R	L	D	L	V	N	A	L	R	G	K	S	S	D	P	D	V	F	L	M	D	V	A	W	L	G	Q	F	I	A	S	G	W
Template Known Secondary structure			S	S									S																		S	T	T										S	S													T	T	T		S	S								T	T	T								T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		96	.	.	.																														100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.				.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.																		.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.																		.	.	.	.	.
Query Sequence		I	D	T	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	R	Q	T	L	L	G	N	S	L	V	V	V	A	P	K	A	S	V	Q	K	D	.	.	.	F	T	I	D	S	K	T	N	W	T	S	L	L	N	G	G	R	.	.	.	.	.
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.																		.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.																		.	.	.	.	.
Template Conservation
Template Sequence		L	E	P	L	D	D	Y	V	Q	K	D	N	Y	D	L	S	V	F	F	Q	S	V	I	N	L	A	D	K	Q	G	G	K	L	Y	A	L	P	V	Y	I	D	A	G	L	L	Y	Y	R	K	D	L	L	E	K	Y	G	Y	S	K	P	P	E	T	W	Q	E	L	V	E	M	A	Q	K	I	Q	S	G	E	R	E
Template Known Secondary structure		B			S								T			G	G	G	B									T			T	T																								T	T			S			S	B																T	T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
																																									139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	V	G	D	P	E	H	V	P	A	G	I	Y	A	K	E	A	L	Q	K	L	G	A	W	D	T	L	S	P	K	L	A	P	A	E	D	V	R	G	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	N	P	N	F	W	G	F	V	W	Q	G	K	Q	Y	E	G	L	V	C	D	F	V	E	Y	V	Y	S	N	G	G	S	L	G	E	F	K	D	G	K	W	V	P	T	L	N	K	P	E	N	V	E	A	L	Q	F	M	V	D	L	I	H	K	Y	K	I	S	P	P	N	T	Y	T	E	M	T	E	E	P	V
Template Known Secondary structure		T		T	T									S	S	S													T	T	T			S					T	T						T	T																	T	S			S		G	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.						.	.	.	.	210	.								.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.		.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.							.	.	.	.	.	.	.																						.
Query SS confidence																												.	.	.	.	.							.	.	.	.	.	.	.																						.
Query Sequence		L	A	L	V	E	R	N	E	A	P	L	G	I	V	Y	G	S	D	A	V	A	S	K	G	V	K	.	.	.	.	.	V	V	A	T	F	P	.	.	.	.	.	.	.	E	D	S	H	K	K	V	E	Y	P	V	A	V	V	E	G	H	N	N	A	T	.	V	K	A	F	Y	D	Y	L	K	G	P	Q	A	A
Query Conservation																												.	.	.	.	.							.	.	.	.	.	.	.																						.
Alig confidence																												.	.	.	.	.							.	.	.	.	.	.	.																						.
Template Conservation
Template Sequence		R	L	M	F	Q	Q	G	N	A	A	F	E	R	N	W	P	Y	A	W	G	L	H	N	A	D	D	S	P	V	K	G	K	V	G	V	A	P	L	P	H	F	P	G	H	K	S	A	A	T	L	G	G	W	H	I	G	I	S	K	Y	S	D	N	K	A	L	A	W	E	F	V	K	F	V	E	S	Y	S	V	Q
Template Known Secondary structure							T	T									T							T	S	T	T		T	T	T	T									B		T	T	S					B									B	T	T		S													T	S
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		247	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	F	K	R	Y	G	F	T	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	G	F	A	M	N	L	G	W	N
Template Known Secondary structure								T
Template Predicted Secondary structure
Template SS confidence
		323	.	.	.	.	.	.	330	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions