Job Description P37329 Confidence 99.59% Date Thu Jan 5 11:55:15 GMT 2012 Rank 59 Aligned Residues 228 % Identity 16% Template d1elja_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.85

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.			.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.																													.	.
Query SS confidence																.	.																													.	.
Query Sequence		A	D	E	G	K	I	T	V	F	A	A	A	S	L	.	.	T	N	A	M	Q	D	I	A	T	Q	F	K	K	E	K	G	V	D	V	V	S	S	F	A	S	S	S	T	.	.	L	A	R	Q	I	E	A	G	A	P	A	D	L	F	I	S	A	D	Q	K	W	M	D	Y	A	V	D	K	K	A	I	D	T	A
Query Conservation																.	.																													.	.
Alig confidence																.	.																													.	.																.
Template Conservation																																																															.
Template Sequence		I	E	E	G	K	V	V	I	W	H	A	M	Q	P	N	E	L	E	V	F	Q	S	L	A	E	E	Y	M	A	L	P	E	V	E	I	V	F	E	Q	K	P	N	L	E	D	A	L	K	A	A	I	P	T	G	Q	G	P	D	L	F	I	.	W	A	H	D	W	I	G	K	F	A	E	A	G	L	L	E	P	I
Template Known Secondary structure																																										T	T									T	T	T	T		S		S				.			G	G	G							T	T		B
Template Predicted Secondary structure																																																															.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
																												100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.							.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	R	Q	T	L	L	G	N	S	L	V	V	V	A	P	K	A	S	V	Q	K	D	F	T	I	D	S	K	T	N	W	T	S	.	.	.	.	.	.	L	L	N	G	G	R	L	A	V	G	D	P	E	H	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.											.	.	.	.	.	.
Template Conservation																																																	.	.
Template Sequence		D	E	Y	V	T	E	D	L	L	N	E	F	A	P	M	A	Q	D	A	M	Q	Y	K	G	H	Y	Y	A	L	P	F	A	A	E	T	V	A	I	I	Y	N	K	E	M	V	S	E	.	.	P	P	K	T	F	D	E	M	K	A	I	M	E	K	Y	Y	D	P	A	N	E	K	Y	G	I	A	W	P	I	N	A
Template Known Secondary structure		T	T	T							T	T	B								T			T	T																		T	T	T		S	S	.	.			S	S													B	G	G	G	T	B		S		B				S
Template Predicted Secondary structure																																																	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.			130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		148	.	150	.	.	.	.																					.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Query Sequence		P	A	G	I	Y	A	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	L	Q	K	L	G	A	W	D	T	L	S	P	K	.	L	A	P	A	E	D	V	R	G	A	L	A	L	V	E	R	N	E	A	P	L	G	I	V	Y	G	S	D	A	V	A	S	K	G	V	K	V
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation
Template Sequence		Y	F	I	S	A	I	A	Q	A	F	G	G	Y	Y	F	D	D	K	T	E	Q	P	G	L	D	K	P	E	T	I	E	G	F	K	F	F	F	T	E	I	W	P	Y	M	A	P	T	G	D	Y	N	T	Q	Q	S	I	F	L	E	G	R	A	P	M	M	V	N	G	P	W	S	I	N	D	V	K	K	A	G	I
Template Known Secondary structure									T	T	T	S			S			T	T	T	T				T	T	S														T	G	G	G	S		S													T	T	S	S	S						G	G	G							T	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		207	.	.	210													.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.		.	.	.	.	.	.	.	240	.	.	.	.	.	.	.			.	.	250	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.																							.																.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.																							.																.	.
Query Sequence		V	A	T	F	.	.	.	.	.	.	.	.	.	.	.	.	P	E	D	S	H	K	K	V	E	Y	P	V	A	V	V	E	G	H	N	N	A	T	.	V	K	A	F	Y	D	Y	L	K	G	P	Q	A	A	E	.	.	I	F	K	R	Y	G	F
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.																							.																.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.																							.																.	.
Template Conservation
Template Sequence		N	F	G	V	V	P	L	P	P	I	I	K	D	G	K	E	Y	W	P	R	P	Y	G	G	V	K	L	I	Y	F	A	A	G	I	K	N	K	D	A	A	W	K	F	A	K	W	L	T	T	S	E	E	S	I	K	T	L	A	L	E	L	G	Y
Template Known Secondary structure														T	T																	B	T	T		S
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions