Job Description P37329 Confidence 97.50% Date Thu Jan 5 11:55:15 GMT 2012 Rank 115 Aligned Residues 182 % Identity 15% Template c3uifA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:sulfonate abc transporter, periplasmic sulfonate-binding PDBTitle: crystal structure of putative sulfonate abc transporter, periplasmic2 sulfonate-binding protein ssua from methylobacillus flagellatus kt Resolution 2.60 Å

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.				.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure																				.	.	.
Query SS confidence																				.	.	.
Query Sequence		I	A	T	Q	F	K	K	E	K	G	V	D	V	V	S	S	F	A	.	.	.	S	S	S	T	L	A	R	Q	I	E	A	G	A	P	A	D	L	F	I	S	A	D	Q	K	W	M	D	Y	A	V	D	K	K	A	I	D	T	A	T	R	Q	T	L	L	G	N	S	L	V	V	V	A	P	K	A	S	V	Q	K
Query Conservation																				.	.	.
Alig confidence										.										.	.	.																														.																												.	.
Template Conservation										.																																										.																												.	.
Template Sequence		F	P	E	E	L	R	K	Q	.	G	I	K	V	E	W	V	P	A	A	X	A	S	V	G	P	V	I	N	E	G	F	A	S	G	K	I	D	F	G	I	Y	G	D	L	P	P	I	I	L	N	.	A	S	K	P	T	V	Q	L	V	A	P	W	G	T	T	S	N	S	Y	L	V	V	P	K	N	S	T	.	.
Template Known Secondary structure									T	.	T										T	T												T	T									S								.			S																					T	T			.	.
Template Predicted Secondary structure										.																																										.																												.	.
Template SS confidence
		57	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	T	I	D	S	K	T	N	W	T	S	L	L	N	G	G	R	L	A	V	G	D	P	E	H	V	P	A	G	I	Y	A	K	E	A	L	Q	K	L	G	A	W	D	T	L	S	P	K	L	A	P	A	E	D	V	R	G	A	L	A	L	V	E	R	N	E	A	P	L	G	I	V	Y	G	S	D	A	V	A
Query Conservation
Alig confidence		.	.	.								.	.	.	.										.	.	.																												.
Template Conservation		.	.	.								.	.	.	.										.	.	.																												.
Template Sequence		.	.	.	A	K	S	I	K	D	L	.	.	.	.	K	G	K	K	I	A	L	H	R	.	.	.	G	R	P	W	E	L	A	F	S	N	L	L	Q	S	E	G	L	T	F	K	D	F	K	I	V	N	V	.	N	P	Q	V	G	A	A	A	L	A	S	G	T	V	D	G	F	F	S	L	F	D	S	Y	I	L
Template Known Secondary structure		.	.	.			S	G	G	G	G	.	.	.	.	T	T	S						T	.	.	.	T	S	T												T	T			G	G	G	S						.												T	S	S	S					S	T	T
Template Predicted Secondary structure		.	.	.								.	.	.	.										.	.	.																												.
Template SS confidence
					133	.	.	.	.	.	.					140	.	.	.	.	.	.	.	.				.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220			.	.	.	.	.	.	.	.				.	230	.	.		.	.	.	.	.	.	.	240
Predicted Secondary structure																						.	.									.	.	.					.
Query SS confidence																						.	.									.	.	.					.
Query Sequence		S	K	G	V	K	V	V	A	T	F	P	E	D	S	H	K	K	V	E	Y	.	.	P	V	A	V	V	E	G	H	.	.	.	N	N	A	T	.	V	K	A	F	Y	D	Y	L
Query Conservation																						.	.									.	.	.					.
Alig confidence																						.	.									.	.	.					.
Template Conservation
Template Sequence		E	D	R	G	V	G	K	I	I	W	S	T	K	T	A	P	V	D	W	K	L	X	G	G	V	W	A	R	N	D	F	V	K	Q	N	P	E	I	T	Q	A	I	V	T	A	Y
Template Known Secondary structure				T	T	S							G	G	G	S		G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions