Job Description P37329 Confidence 99.93% Date Thu Jan 5 11:55:15 GMT 2012 Rank 11 Aligned Residues 222 % Identity 14% Template c3kn3C_ PDB info PDB header:transcription Chain: C: PDB Molecule:putative periplasmic protein; PDBTitle: crystal structure of lysr substrate binding domain (25-263) of2 putative periplasmic protein from wolinella succinogenes Resolution 2.41 Å

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		28	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		K	I	T	V	F	A	A	A	S	L	.	.	T	N	A	M	Q	D	I	A	T	Q	F	K	K	E	K	G	V	D	V	V	S	S	F	A	S	S	S	T	L	A	R	Q	I	E	A	G	A	P	A	D	L	F	I	S	A	D	Q	K	W	M	D	Y	A	V	D	K	K	A	I	D	T	A	T	R	Q	T	L	L
Query Conservation												.	.
Alig confidence												.	.																																						.																								.	.
Template Conservation																																																			.																								.	.
Template Sequence		E	L	R	X	A	T	T	T	S	T	D	N	T	G	L	L	D	V	L	A	P	A	Y	K	K	D	T	G	V	D	L	K	W	V	A	V	G	T	G	N	A	L	K	L	G	E	N	C	D	.	V	D	V	V	F	V	H	A	P	K	V	E	L	E	Y	V	E	K	G	F	G	I	D	.	.	R	T	P	V	X
Template Known Secondary structure																																																T	T		.		S					S											T	T	S				.	.
Template Predicted Secondary structure																																																			.																								.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.			.	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.			170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure																																																																		.	.
Query SS confidence																																																																		.	.
Query Sequence		G	N	S	L	V	V	V	A	P	K	A	S	V	Q	K	D	F	T	I	D	S	K	T	N	W	T	S	L	L	N	G	G	R	L	A	V	G	D	P	E	H	V	P	A	G	I	Y	A	K	E	A	L	Q	K	L	G	A	W	D	T	L	S	P	K	.	.	L	A	P	A	E	D	V	R	G	A	L	A	L	V
Query Conservation																																																																		.	.
Alig confidence																																																																		.	.
Template Conservation
Template Sequence		Y	N	D	F	V	I	I	G	N	P	S	F	K	Q	K	F	T	G	X	S	V	A	E	A	F	K	L	I	E	K	E	Q	V	K	F	V	S	R	G	D	K	S	G	T	H	S	K	E	R	E	V	W	K	E	A	L	G	K	I	P	E	K	E	S	W	Y	I	E	A	G	Q	G	X	L	A	T	I	N	I	A
Template Known Secondary structure											G	G	G	T	T	T	T	T	T													T	T								S	S	S															S	S			T	T		T	T						S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.					.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.					.	.	.	230	.	.		.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure																					.	.	.	.																									.	.	.	.							.
Query SS confidence																					.	.	.	.																									.	.	.	.							.
Query Sequence		E	R	N	E	A	P	L	G	I	V	Y	G	S	D	A	V	A	S	K	.	.	.	.	G	V	K	V	V	A	T	F	P	E	D	S	H	K	K	V	E	Y	P	V	A	V	V	E	.	.	.	.	G	H	N	N	A	T	.	V	K	A	F	Y	D	Y	L	K	G	P	Q	A	A	E	I	F	K	R	Y
Query Conservation																					.	.	.	.																									.	.	.	.							.
Alig confidence																					.	.	.	.																									.	.	.	.							.
Template Conservation
Template Sequence		E	E	Q	K	G	L	T	L	T	D	R	G	T	F	I	K	Y	E	S	N	H	K	G	K	P	P	X	V	I	V	L	E	G	D	N	T	L	K	N	F	Y	S	I	X	A	V	N	P	K	R	C	E	K	A	D	Y	K	G	A	K	Q	F	I	D	W	I	V	S	E	K	X	Q	A	E	I	A	N	F
Template Known Secondary structure				T	T		B														T	S		S	S		S									G	G	G											T	T	T		T	T	S													T	S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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